Gene DvMF_0266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0266 
SymbolileS 
ID7172148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp302686 
End bp305502 
Gene Length2817 bp 
Protein Length938 aa 
Translation table11 
GC content66% 
IMG OID643538762 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002434691 
Protein GI218885370 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.0463751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT ACAAGAAGAC CCTGCATCTG CCCGACACCA AATTTCCCAT GAAGGCCAAC 
CTCACCCAGC GCGAGCCGGA AATGCTCAAG TTCTGGGAAG GCATCGACGC CTACGCCGCC
ATGGCGCAGG CCTCCGGCCA GAAGGGCCAG TACGTCCTGC ACGACGGCCC CCCCTACGCC
AACGGGCACA TTCACCTGGG GACGGCGCTG AACAAGATAC TGAAGGACAT GGTGGTCAAG
TCGCGCAACA TGCAGGGCTA CGCCGCCCGC TACGTGCCCG GCTGGGACTG TCACGGCCTG
CCCATCGAAC ACAAGGTGGA ACAGGAACTG GGCGAAAAGA AAAAGGAACT GCCCGCCCAC
GTGGTGCGCA AACGCTGTCG CCAGTACGCG GAAAAGTACC TGGACATCCA GCGCAAGGAA
TTCAAGCGCC TTGGGGTGCT GGGTGCCTGG GACAAGCCGT ACATGACCAT GGACCCGGCC
TACGAGTCCG CCACCGCGCG CGAGCTCGGC AACTTCGTGG CCGCTGGCAA CGTGGTGCGC
AGCAAGAAGC CCATCTACTG GTGCTGCTCG TGCCAGACCG CCCTGGCCGA AGCCGAGGTG
GAATACTACG ACCACACCTC GCCCTCCATC TTCGTGCGCT TTCCCCTGCG CGACCCCAAG
GTGGCGGACG TATTGAACGT GGATCCGGCC AGCGCCTGGA TCGTCATCTG GACCACCACC
CCGTGGACCC TGCCCGACAA CATGGCCGTG GCCGTGCACC CCGACCATGA CTACGCCGTG
GTCCGCCACG ACGGCGCGCA CTACGTGCTG GCCGCCGCGC TGGTGGAAAG CAGCGCCAAG
ACCTTCGGCT GGGAAAACTG CGAAGTGGTG TCCACCGTGC CGGGGGCGAA GCTGGAAGGC
CTTGTCGCCA CGCACCCCTT CTACGACCGC CCCTCTCCTG TGGTGCTGGC CGACTACGTG
GTGCTCGATT CCGGCACCGG CTGCGTGCAC ACCGCGCCCG GCCATGGCCG CGAGGACTAC
GAGACCGGCC TGCGCTACGG GCTGGAAATC CTTTCGCCGC TGAACGATGA AGGCCGCTTC
CTCGATTCCG TGCCCTTCTT TGCCGGGCTG ACCGTGTTCG AGGCCAACCC CAAGGTCATC
GAAAAACTGC GCGAAGTGGG CAACCTGCTG GCAGAGCGCA AGATTTCGCA CAGCTACCCG
CACTGCTGGC GCTGCAAGAA GCCGGTCATC TTCCGGGCCA CCACCCAGTG GTTCATCGCC
ATGGAAAAGA ACGACCTGCG CGCCCGCGCG CTGTCGGCCA TCCGCAACGA CGTGCGCTGG
ATTCCCGCCT GGGGCGAGGA ACGCATCCAC AACATGATCG AATTCCGCCC CGACTGGTGC
ATCTCGCGCC AGCGCACCTG GGGCGTGCCC ATCATCGCCC TGCTCTGCGA AGGCTGCGGC
GAGGCGTGGA ACGACGCCGC CTGGATGCGC GACATTGCCG ACCGCTTCGC CAAGCACCCC
ACCGGCTGCG ACTACTGGTA CGAAACGCCG CTGGAAGGCA TCGTGCCCGC CGGCCTTGCC
TGCCCGCACT GCGGCGGCAA CCACTGGAAG AAGGAAACCG ACATCCTGGA CGTGTGGTTC
GATTCCGGCA CCAGCTTCTC CGCCGTACTG GAACAGCGCG GCGACACCGC ATTTCCGGCG
GACCTGTACC TGGAAGGCTC TGACCAGCAC CGCGGCTGGT TCCACAGCTC CCTGCTGGCC
TCCATGGGCA CGCGCGGCGT GCCGCCCTAC CGCGCCGTGC TCACCCACGG CTACGTGGTG
GACGGCGAAG GCCGCAAGAT GTCCAAGTCC ATCGGCAACG TCATCGCCCC GCAGGAGATC
ATCGACAAGT ACGGCGCGGA AATCCTGCGC CTGTGGGTGG CCTCCGTCGA TTACCGCGAA
GACATCCGCA TCTCGGACGA AATCCTGAGC CGCCTTGTGG ACGCCTACCG GCGCATCCGC
AACACCTGCC GCTACCTGCT GGGCAACATC GACGACCTCA CGCCCGAGGA AATCGTGCCC
TTCTCGGTCA TGGACCCGCT GGACCGCTAC GCGCTGGACA TCGTCACCGA CGCCCACGCG
CGCATCCAGG AAGCGTATTC CGAGTTCGAG TTCCACAAGG TGTTCCACAC CCTGCACAAC
CTGTGCGTGA CCGACCTCAG CGCCTTCTAC CTCGACGTGC TGAAGGACCG CCTGTACGCC
TCGGCCAAGG ACAGCCCGGA ACGCCGCTCG GCCCAGACGG CCCTGCTGCA CATCCTGCTG
GTGCTGGTGC GCGACATGGC CCCGGTGCTC AGCTTCACGG CGGAGGAAGT GTTCCGGCAC
ATCCCCGAGG CGCTGCGCCC CGCCGCGGCC ACGGTGTTCG CCCTGCGCGG GTCGGATACG
CCGCTGTACA ACGTCAGCTC CGACGAGAGC GAACGGTGGG AGGCGGTGCT GGCCGTGCGG
TCCGAGGTGA CCAAGGCCAT CGAGCCGCTG CGCAAGGCGG GCACGGTGGG CCACTCGCTG
GATACCCACG TGACCCTGTA CGCCGACCAC AAGCTGGCCG ACCTGCTGCG CGCCACCGGC
ACCGACCTGC GCGCGGTGTT CATCGTCTCC AAGCTGAACA TCGCCCCGCT GGAAGACGCC
CCGCAGGACG CCTTTGCCTC CGATGAGGTC AAGGGCCTGC GCATCGGCGT GGCCAAGGCC
CCCGGCGCCA AGTGCGAACG CTGCTGGATC TACCACGAGG AACTGGGCGC CGATCCCGGT
TACCCCGGTG CCTGCGCCCG CTGCACCACG GTGTTGCGTA CCAGCGGCGC CGAATAA
 
Protein sequence
MSDYKKTLHL PDTKFPMKAN LTQREPEMLK FWEGIDAYAA MAQASGQKGQ YVLHDGPPYA 
NGHIHLGTAL NKILKDMVVK SRNMQGYAAR YVPGWDCHGL PIEHKVEQEL GEKKKELPAH
VVRKRCRQYA EKYLDIQRKE FKRLGVLGAW DKPYMTMDPA YESATARELG NFVAAGNVVR
SKKPIYWCCS CQTALAEAEV EYYDHTSPSI FVRFPLRDPK VADVLNVDPA SAWIVIWTTT
PWTLPDNMAV AVHPDHDYAV VRHDGAHYVL AAALVESSAK TFGWENCEVV STVPGAKLEG
LVATHPFYDR PSPVVLADYV VLDSGTGCVH TAPGHGREDY ETGLRYGLEI LSPLNDEGRF
LDSVPFFAGL TVFEANPKVI EKLREVGNLL AERKISHSYP HCWRCKKPVI FRATTQWFIA
MEKNDLRARA LSAIRNDVRW IPAWGEERIH NMIEFRPDWC ISRQRTWGVP IIALLCEGCG
EAWNDAAWMR DIADRFAKHP TGCDYWYETP LEGIVPAGLA CPHCGGNHWK KETDILDVWF
DSGTSFSAVL EQRGDTAFPA DLYLEGSDQH RGWFHSSLLA SMGTRGVPPY RAVLTHGYVV
DGEGRKMSKS IGNVIAPQEI IDKYGAEILR LWVASVDYRE DIRISDEILS RLVDAYRRIR
NTCRYLLGNI DDLTPEEIVP FSVMDPLDRY ALDIVTDAHA RIQEAYSEFE FHKVFHTLHN
LCVTDLSAFY LDVLKDRLYA SAKDSPERRS AQTALLHILL VLVRDMAPVL SFTAEEVFRH
IPEALRPAAA TVFALRGSDT PLYNVSSDES ERWEAVLAVR SEVTKAIEPL RKAGTVGHSL
DTHVTLYADH KLADLLRATG TDLRAVFIVS KLNIAPLEDA PQDAFASDEV KGLRIGVAKA
PGAKCERCWI YHEELGADPG YPGACARCTT VLRTSGAE