Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0042 |
Symbol | |
ID | 7171914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 54126 |
End bp | 55274 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643538533 |
Product | diguanylate cyclase |
Protein accession | YP_002434471 |
Protein GI | 218885150 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCCC TGTCCATGGC ACTTTGCGTG CTCTGCGCCG TCACCGTGGG GCTGCTGCTT GTGCACGGCC ATCTGGATGG CGACCGGCAC GACCTGCGGC TGCTGGCATG GGGCAAGGGC ATGCAGGCCG CGGGCTGGCT GGGCTTCGGC CTTGCCTCCA CGGTTTCAGA CGTATTGCCG CCGTTCCGCT ACCTGCTGCT GGTGGGGCTG GGCATGGAGG CGCTGGCCAT GCTGCGGGTG CGCACCGGTC GTCCGGTGCG GGTGTTGCCC TGGCTGGGCG GGCTGGTGGT GCTGCACGCG GTGCTGGCGA TGGTCGTGGC CGAGCGGCCT TTCGAGGTGC GGGCCTTCGT CCAGACGCTG GCGGCGGCCC TGCTGTTCCT GCCTTGCGGA GCACTGCTGC TTGCCGCGCC CGACGTGAGG TCGCAACGCC TCTACCGGGT GACCGGCGGC GCGTACCTGC TGGTGGCGAT GTTCGCGCTG GCCAGGGGAG GGTACATGCT GGCCCGGCAC GAGGGGGCGG ACCTTCCCGC CGTGCCGCAC ATGGAGATGG TGGGGCTGCT GCTGTTGCAG GCCCTGGCGT TCATCGGGTG CGTGTGGTTC GTGGTGGTGC TGCGCGAACG GTACGAGGCG CACATCCACC GTCTGGCCAC CACCGACGCC CTGACCGGGC TGCACAACCG CCGCCATTTC CTGTCCGCCG CGGAACCAGC GCTGGCCCTT GCCGCGCGCA AGGGTACTCC GGTGGGCGTG CTGATCTTCG ACGTGGACCA CTTCAAGCGG GTCAACGATA CCCACGGCCA CTCCGTAGGC GATGCGGTGC TGCGCTGCAT CGGCGAGGTG CTGCCCACGC TGGTGCGTGG CTATGACGCC ACCTGCCGCT ACGGCGGCGA GGAGTTCGCG GCGCTGCTGC CAGACGCCGA CGGCGCGGTG ACCGACCTCG TGGGCGAGCG CATCCGGCAG GGGCTGGAGC AGGCCGGGCG TCAGGCGGCG GAAGAGGGCA GGGCCGTGGT GTTTACCGCG AGCGTGGGCG GCAGCTGCCG CGTGCCCGCC GGACCGCAGG ATCTGGACGC CCTGCTGGCC GAGGCGGACG CGGCCCTGTA CGAAGCAAAG CGCGGGGGCC GCAATGCCTA CCGGCGGCAT GAGGCCTGA
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Protein sequence | MASLSMALCV LCAVTVGLLL VHGHLDGDRH DLRLLAWGKG MQAAGWLGFG LASTVSDVLP PFRYLLLVGL GMEALAMLRV RTGRPVRVLP WLGGLVVLHA VLAMVVAERP FEVRAFVQTL AAALLFLPCG ALLLAAPDVR SQRLYRVTGG AYLLVAMFAL ARGGYMLARH EGADLPAVPH MEMVGLLLLQ ALAFIGCVWF VVVLRERYEA HIHRLATTDA LTGLHNRRHF LSAAEPALAL AARKGTPVGV LIFDVDHFKR VNDTHGHSVG DAVLRCIGEV LPTLVRGYDA TCRYGGEEFA ALLPDADGAV TDLVGERIRQ GLEQAGRQAA EEGRAVVFTA SVGGSCRVPA GPQDLDALLA EADAALYEAK RGGRNAYRRH EA
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