Gene Dtur_1629 details

Gene Information

• Locus tag: Dtur_1629
• Symbol: aksA
• ID: 7082147
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dictyoglomus turgidum DSM 6724
• Kingdom: Bacteria
• Replicon accession: NC_011661
• Strand: +
• Start bp: 1645823
• End bp: 1646971
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643458738
• Product: trans-homoaconitate synthase
• Protein accession: YP_002353516
• Protein GI: 217968010
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0119] Isopropylmalate/homocitrate/citramalate synthases
• TIGRFAM ID: [TIGR02660] homocitrate synthase NifV

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATA CTGAGATAAA AATTGTAGAC ACCACATTAA GAGATGGTGA GCAAACTGCT 
GGTGTAGTAT TCTCAAAAGC TGAAAAACTT CAGATTGCAA GAATGCTTGA TGAGATAGGA 
GTACATCAGA TTGAGGCGGG AATTCCGGTG ATGGGAGGAG ACGAGGAAGA AGCAATAAAA 
GCTATAGTCA AAGCAGGATT AAAGGCAAGT ATTATGGGAT GGAATAGAGC TGTAATAAGT 
GATATTGAGG CATCTTTAAG ATGTGGTGTA GATGCGGTGG CTATTTCTAT TTCCACATCA 
GATATTCATA TTAAATATAA GCTTAAGAAA ACCAGAGAGT GGGTCTTAGA AAGTATGGTA 
AAAGCAACAG AATTTGCAAA AAAACACGGA GTTTACATAT CAGTAAATGC CGAGGATGCT 
TCCAGAACTG ATATGGACTT CCTATTACAG TTTGCAAAAG CTGCAAAAGA AGCGGGAGCA 
GATCGTCTAA GATATTGTGA CACTGTAGGA ATAATGGAAC CCTTCACCAT GTACGAGGTG 
ATAAAGACCA TCATTGAAAA AGTAGGAATA CCTGTGGAAA TGCACACCCA TAATGATTTT 
GGAATGGCTA CTGCTAATGC TCTTGCAGGG GTGAGAGCAG GTGCAACCTA TGTGGGGGTA 
ACTGTAAATG GACTTGGAGA AAGAGCAGGA AATGCTGCAT TAGAAGAAGT AGTTATGGCA 
CTTAAATATA TCTATAACAT TGATGTGGGC ATCAAAACCT ATAAACTCAG AGAGCTTAGC 
GAATATGTAG CAAAAGCCTC TCAAAGGGAG CTCCCTGTAA ATAAAGCAAT TGTAGGTAAA 
AATATTTTTG CCCATGAATC AGGAATCCAT GCTGATGGTG TAATTAAATA TCCAAAAACC 
TACGAGGTTT TCTCTCCTGA AGAAGTGGGA GGAGAGAGAC AGATAGTTAT TGGAAAACAT 
TCAGGAACCC ATGCTCTTAT AAGAAAATTC CAAGAGTATG GTATTACCCT TTCGGAAGAA 
GATGCCCAAG AATTACTTAA GAAAGTAAGA GCCCTTGCAG TAGAGCTTAA AAGACCATTA 
TTTGATAAAG AGTTAATGTA TCTCTATCAA GATTATCTGA AAGAGAAGGC TGAAAAAGAA 
GGAGTGTAA 

 

Protein sequence

MKNTEIKIVD TTLRDGEQTA GVVFSKAEKL QIARMLDEIG VHQIEAGIPV MGGDEEEAIK 
AIVKAGLKAS IMGWNRAVIS DIEASLRCGV DAVAISISTS DIHIKYKLKK TREWVLESMV 
KATEFAKKHG VYISVNAEDA SRTDMDFLLQ FAKAAKEAGA DRLRYCDTVG IMEPFTMYEV 
IKTIIEKVGI PVEMHTHNDF GMATANALAG VRAGATYVGV TVNGLGERAG NAALEEVVMA 
LKYIYNIDVG IKTYKLRELS EYVAKASQRE LPVNKAIVGK NIFAHESGIH ADGVIKYPKT 
YEVFSPEEVG GERQIVIGKH SGTHALIRKF QEYGITLSEE DAQELLKKVR ALAVELKRPL 
FDKELMYLYQ DYLKEKAEKE GV