Gene Dtur_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1602 
Symbol 
ID7082120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1618744 
End bp1621215 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content33% 
IMG OID643458711 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_002353489 
Protein GI217967983 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0450793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAT GGGTTTTCCT CTTTGAGGAA AATAAAGGGC AGGAAGAGGT TTTGGCAAGA 
AAGCTTGGAA TATCATCTCT TCTTGCCCGA CTCCTTTTGA ATCGAGGAAT AAGTGAACCT
TCAAAGGCAA AAAAATTTTT AAATCCTAAG ATAGAAGATT TATATGATCC TTTTACTTAT
TTTCCCGATT TAGAAAAGGC TATAGATTTC TTAATTAAGC TAAGAAATGC TAAGAGAAAG
ATACTTGTTT TTGGAGATTA TGACGTAGAC GGAATAACTG CTACAACCCT TATGTATAGA
GTTTTATCCC ATTGGGGGTG GGATGTAAGT TTTTATGTGC CTCATAGACT GGATGAAGGG
TATGGGTTAA AGGAAAAAAG TGTTAAAAAA GCGTTATCTC AAAATGAGTT TATAGGTCTA
TTAATTACTG TGGATTGTGG GATTAAAAGT AAAAAAGAGG TTGAATATTT AAAGAAAAAT
GGAGTTGAAG TTATTATTAC TGATCATCAT ATTCCTGAGG AAGGAAGTAT TCCAGAAGCT
CTTCTTGTGC TTGATCCTTA CTTAAACAAT TATCCCTATC CATATATGGC AGGAGTTGGA
GTTGCTTTTA AGTTCCTAAA AGCCCTGGGA GATGCAATAG GGAAAGATAT TTATAAAGAA
AAGGGGGTAT TAGAATTAGT AACCTTAGGA ACCTTGGGAG ACTTAATGGA GCTTAAAGAT
GAGAATAGGG TCCTTGTTAG ATATGGTCTT GAGAAGATTT TAAATTCCGA TCTTGTAGGA
GTTAGAACTC TTATTAGAAA AGTAGGGCTT GATAAAAATA CTTTTATAAG TTCAAAGGAT
ATTATTTTTA ATATAACTCC AAGGATAAAT GCCATAGGTA GATTCAAAGA GGTAGAAGAA
GCAATAAGAC TATTTCTTAC TGAAAATGTA GAAGAAGCTG AGATACTTTT TGATAAACTT
GACGAATTTA ATAGGAAAAG AAAAGAAGAG GTAGAAAGAG TTTACGAGAT GGCAAAAGAG
ATGTTAAGAG AGGAGGATAT AGAAAATAAT AAAGCAGTAT TTTTATACAA TAGTTTGTGG
GGGAGAGATG TGGGTGGGGT AATGGGAATT GTAGCTTCTA TGCTTGTAGA AGAATATAAT
GTGCCCTTCT TTCTTGGAAG AAAAGAAGGA GAGTTTATTG TCTTTTCAGG GAGAGGAGTA
GAAGATGTAA ATTTATTTGA ATTTGTCTCT AAGTTATCAG ACTATTTAAT AAACTTTGGT
GGACATAAAG GAGCTGTTGG TTTTTCTCTG TTTGAAAAAG ACTATGAGGA TTTTAAGAAT
AGTGCAGTAA GGCTTGCAAA TGAAATTTGG AAGGAATTAG ATTTTACTCC AAAGGTTAAG
ATAGATGCTG AAATTCCTTT AGATAAGATT AAAAGTGAAA ATATTGGTAA GTTTCTTTCT
GAGCTTGATA TGCTTTCGCC TTTTGGTCCA GGTAATGAAG AACCAAGGTT CAAAATAAAT
TCAACGGTTA TTGCATATTT TGAAAAAATG GGAAATGGAG GAAGATATAA GATTAAAATT
GGTGATATAT CGGGAAAAAT TTTGTCAACT CCCATTTTTT CTCTTGGAAT AGAGGAAGAA
GCGCTAAAAG AGTCTCCTCA AACAGTGGAT ATTGTCTTGA GAATAGAAAA AGAGGGATAT
CAAGGTAGAG AATATTTCAA TTTTTATTTG GAAGAATGGA GAGAGGCTGA AAAGAAAGAG
AAAGAAGAAA AGAGAGAAAA GATAAGGGCA ATTTTGTATT TTCTTGAGAA TGATACAGAG
AAGACTTTTC TTATAGAGGA AATAAAAAAG AGAGGTAGAG AATATGCTAT TATTTCCCCT
TACTGGAATA AAGTTTATTG GAATGAAGAG ATTGTGTCTC CATGGGATTT CTCTATAGAT
CTTTCAAAAG ACAAAGTTAT CATCTGGGAT GATGCAGAAT GGTTTTTAAA TGAGGAATTT
TATGAGAGGT TTTTGGTAAA GATAAGAAAT ATAAATAATC CTATCATTTT CCTTTCTAAT
CTTAAGAAGG AAGAAAAAAG ATTAAATTTG TCCGATATAC TTGGTATTAA GAATTTGCGA
ATACCAAAAA AGTCTTTTAA TCCTGCTTTT ATTGATGTTA GATTTTCGAA AAATAAGGAA
AAGGATTTAC AGTTTTTTGA GGGAAAAGAC GTGTACTTCT ATCCTAATAA AGTACCTATA
AGGATGTATA GATATTTGAT TTTTCTCAAG CCTCCGTTGA CAGAAGTAGA ATTTGTAAGA
TGGTCAAAAT TTGGCCAGAA TATAGTTCTT CTATTTGGAA AGGAAGATTT TATATACAGC
TATAAGAAGG TGCAAGAAGT TTCTATGGGA CTATTGAAAG AAGAGAGAGA ATTTTTTGTT
ACTCAATCTC ATAATTTTCT CCTCTTTCTT CAGAAGGCAC GACCATCGGA GATATATTCT
CTTCTTGTGT AA
 
Protein sequence
MRRWVFLFEE NKGQEEVLAR KLGISSLLAR LLLNRGISEP SKAKKFLNPK IEDLYDPFTY 
FPDLEKAIDF LIKLRNAKRK ILVFGDYDVD GITATTLMYR VLSHWGWDVS FYVPHRLDEG
YGLKEKSVKK ALSQNEFIGL LITVDCGIKS KKEVEYLKKN GVEVIITDHH IPEEGSIPEA
LLVLDPYLNN YPYPYMAGVG VAFKFLKALG DAIGKDIYKE KGVLELVTLG TLGDLMELKD
ENRVLVRYGL EKILNSDLVG VRTLIRKVGL DKNTFISSKD IIFNITPRIN AIGRFKEVEE
AIRLFLTENV EEAEILFDKL DEFNRKRKEE VERVYEMAKE MLREEDIENN KAVFLYNSLW
GRDVGGVMGI VASMLVEEYN VPFFLGRKEG EFIVFSGRGV EDVNLFEFVS KLSDYLINFG
GHKGAVGFSL FEKDYEDFKN SAVRLANEIW KELDFTPKVK IDAEIPLDKI KSENIGKFLS
ELDMLSPFGP GNEEPRFKIN STVIAYFEKM GNGGRYKIKI GDISGKILST PIFSLGIEEE
ALKESPQTVD IVLRIEKEGY QGREYFNFYL EEWREAEKKE KEEKREKIRA ILYFLENDTE
KTFLIEEIKK RGREYAIISP YWNKVYWNEE IVSPWDFSID LSKDKVIIWD DAEWFLNEEF
YERFLVKIRN INNPIIFLSN LKKEEKRLNL SDILGIKNLR IPKKSFNPAF IDVRFSKNKE
KDLQFFEGKD VYFYPNKVPI RMYRYLIFLK PPLTEVEFVR WSKFGQNIVL LFGKEDFIYS
YKKVQEVSMG LLKEEREFFV TQSHNFLLFL QKARPSEIYS LLV