| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0843 |
|---|
| Symbol | |
|---|
| ID | 7082796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 865689 |
|---|
| End bp | 866360 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643457917 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002352738 |
|---|
| Protein GI | 217967232 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000467073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA GTATAATTAA TGTAATTAAA GGAAAGTACC CCCTTTCAAC TCATACCTCC
CAGCCGTCTC CCCTCGGCTG GGAGGAGAAA AATAAGCTTT CTGATCAGTC TTTGATATCT
TTGATAAAGA ATGGAGATAA AGAGGCCTTT AATATATTAG TAAAAAGGTA CGAAAAGAAG
GTCTTGAACA TTCTTTATCT ACAATTGGGG AATATTCCTG ATTTAGAGGA TCTTGCTCAA
GAGGTTTTTA TTAAAATTTT TAAGAATATC AAGGGATTTA GAGGAGAGGC AAAGTTTTCT
ACTTGGATCT ATAGGATTAC TATGAATGTG GCTTATGATT ATAAAAGGAA AAATAAAGAA
ATGTATTCCT TAGATGAGCC AATGAAGGAG GATGAAGAAG ACACCTTTGA AAAAGTTATT
CCCAGCGAAG AAGAAGATCC TCTTTCGGTA GTAGAGAGAG AGGATATAAG AAGTAAATTA
CAAAAATTGA TAAGAGAACT TCCTAAGGAA TACCAAGAGG TTTTAATTTT GCGAGAGTAT
GAAGGACTAT CTTACGAAGA GATCTCAAAT ATTCTTAAAT GTCCTGTGGG CACTGTAGAA
TCTCGCCTTT TTAGAGCAAG AAGGGAGTTA AAAGAAAAGT TGTTAAGGGA AGTAGGGAGT
TATGCGTTGT AA
|
|---|
| Protein sequence | MEKSIINVIK GKYPLSTHTS QPSPLGWEEK NKLSDQSLIS LIKNGDKEAF NILVKRYEKK
VLNILYLQLG NIPDLEDLAQ EVFIKIFKNI KGFRGEAKFS TWIYRITMNV AYDYKRKNKE
MYSLDEPMKE DEEDTFEKVI PSEEEDPLSV VEREDIRSKL QKLIRELPKE YQEVLILREY
EGLSYEEISN ILKCPVGTVE SRLFRARREL KEKLLREVGS YAL
|
|---|
| |