| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3429 |
|---|
| Symbol | |
|---|
| ID | 7381963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3673725 |
|---|
| End bp | 3674441 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643656750 |
|---|
| Product | riboflavin synthase subunit alpha |
|---|
| Protein accession | YP_002554856 |
|---|
| Protein GI | 222112592 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0307] Riboflavin synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.399055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACAG GCATCGTCCA GGCCACCGCG CGCATCGCCG CCATCGACGA CCGCGCCGGC
CTGCGTACCT TCACCCTCGA ATTCCCCGCT GGCTTCTGCC AGGACCTCGC CATCGGCGCC
AGCGTGGCGA CGGACGGCGT GTGCCTCACG GTGACCGAGA TCCTCTCGCC CACGCGCGCC
ACGTTCGACG TGATGCTGCA AAGCCTGAAC ATCACCACGC TGGGCAGCTA CGCCGTGGGC
GACCGCGTGA ACGTGGAGCG TGCCGCCAAG GAGGGCGCCG AGATCGGCGG CCACCCCCTG
TCGGGCCACA TCGACTTCAC CGGGCAACTG GTGCAGCGGC GCGAACTGGA CAACAACCTG
GTGTGGCGCG TGGCCGTGCC CGAGGCGTTT CGGCGCTACG TGTTCGCCAA GGGCTACATC
GCCCTCCACG GCGCCAGCCT CACCGTGGCC GAGGTGGACC GCGCCGAGGG TTGGTTCGAG
GTCTGGCTGA TCCCCGAGAC GCGCCGCGCC ACCGTGTTCG AGGACGTGCA GGTGGGTGAC
CGCCTGAACA TCGAGATCGA GCGCAGCACC CAGGTGGTGG TGGACACCGT GCGCGAAGCG
GTGCAGGAAA GCCTGGGCCG CCTGGCGCCG GTGCTGGAGG GCCTGCTGAA AGAGAAGGGC
CTGTCGCTGG ACGACTACCT GCCGCACCCG TCCAGGGCCC TGCCGCCGCA GCGATGA
|
|---|
| Protein sequence | MFTGIVQATA RIAAIDDRAG LRTFTLEFPA GFCQDLAIGA SVATDGVCLT VTEILSPTRA
TFDVMLQSLN ITTLGSYAVG DRVNVERAAK EGAEIGGHPL SGHIDFTGQL VQRRELDNNL
VWRVAVPEAF RRYVFAKGYI ALHGASLTVA EVDRAEGWFE VWLIPETRRA TVFEDVQVGD
RLNIEIERST QVVVDTVREA VQESLGRLAP VLEGLLKEKG LSLDDYLPHP SRALPPQR
|
|---|
| |