| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3425 |
|---|
| Symbol | |
|---|
| ID | 7383664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3669948 |
|---|
| End bp | 3670433 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643656746 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_002554852 |
|---|
| Protein GI | 222112588 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.70639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAACC GCTGGAAACC CAACGTCACC GTGGCCGCCA TCGTCGAGCG CGAGGGCCGC
TTTCTGTTCG TCGAGGAAGA CACGGCCGAC GGGCTGCGGC TGAACAACCC CGCGGGCCAC
CTGGACCCGG GAGAGTCGCC CATCCAGGCC TGCGTGCGCG AGGTGCTGGA GGAGACGGCC
TACGACTTCG AGCCCACGGC GCTGGTGGGC GTGTACCTGA ACCGCTTCAC GCGCACGCGC
ACGGGGGACG ACATCACCTA CCTGCGCTTT GCGTTTGCGG GCAATGTGGG CGCGCACCAC
GCCTGGCGGT CGCTGGACGA CGGCATCCTG CGCGCCGTGT GGCTCACCCC CGAGGAGCTG
CGCAGCTGCA GCGCGCGCCA CCGCAGCCCG CTGGTGCTGC AGTCCGTCGA GGATTACCTG
GCCGGCCGGC GCGCGCCGCT GGAGCTCATC CACACGGATG CCAGCGTGCT GCAGCCGCCG
CGCTGA
|
|---|
| Protein sequence | MPNRWKPNVT VAAIVEREGR FLFVEEDTAD GLRLNNPAGH LDPGESPIQA CVREVLEETA
YDFEPTALVG VYLNRFTRTR TGDDITYLRF AFAGNVGAHH AWRSLDDGIL RAVWLTPEEL
RSCSARHRSP LVLQSVEDYL AGRRAPLELI HTDASVLQPP R
|
|---|
| |