| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3418 |
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| Symbol | |
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| ID | 7383657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3661377 |
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| End bp | 3663098 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643656739 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002554845 |
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| Protein GI | 222112581 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTTCC TGTGGACGCA GACGGTGGAC ACTGAAGACA ATATGTCCGC CAAAAACACA
TCACAGATAC CGATGCAGAC AGTCTTTCTT TCCGAGCAGC GGCTTGGCGT CCTCGTCTGG
CAGCGCGGTG AGCCCGCGCC CGTGGCGCGG CTTGGGCTGG CGCGCGATCC GCTGCTGTGC
GCCGCCGTGG CCGAGAAGCG GGCCGCGCGC GAGCCGGGGC CGGGCACGCT GTTCCATGTG
GACGTGCCCG GCGGGCGCGG CGCCAGCGCG CGCTACGCGG TGGTGGCGCT GGGTGACGAG
GCCGTGGAGG TCGCCCTGGT GCGCCCGGCC GACGCATCGG CCGCGCTGAT CGACTTCGTC
GCATCCGTGC CGTTTGCGTT CGCCATCCTG AACATGTTCC TCACCAACCC CTACCAGGCC
ATCACCGTGG CCGACCACGA GGGCCTGATG CGCTATATCA GCCCGGTGCA CGAGAAGTTC
CTCGGGCTGG CGCCGGGTGC AGCCATGGGG CGCAAGGCCG AGGAGGTGAT ACCCAACTCG
CGCCTGCCGC AGGTGGCCCG CAGCGGCAAG GCCGAGATCG GCGAAATGCT GCAGCTCGGC
CCCGGCGTGA CGCGTATCGT CAACCGCATG CCGGTCTTCG AGGGCGGCGC GCTGGTGGGC
GCGGTGGGCC AGGTCAGCTT CAGCGGCATG CCGGCGCTCA ACCGCATGCA GCAGCGCCTG
AACCAGCTGC ACGATGAGGT GCAGCACTAC AAGCGCGAAC TGCACCAGCT CAAGCGCACG
CCATCCCCTG GCGCCATGGT GGGCAGCAGC GCGCCCATGC AGCGCCTGGC GCGCGAGATC
GACGCCGTGG CGCCGCTGGA CGTGCCCGTG CTGATCCTCG GCGAGAGCGG CACCGGCAAG
GAACTGGTGG CCCAGGCCCT GCACGCGCGC GGACGCGATG CCCAGGCGCC ACTCGTGAGC
CTGAACCTCG CCGCGCTGCC CGCGACCCTG ATCGAGGCCG AACTCTTCGG CTACGAGGCT
GGCGCCTTCA CGGGCGGCAA GAAGCAGGGC CAGCCTGGCA AGCTGGAGCA GGCCGAGGGC
GGCACGCTGT TCCTCGACGA AGTGGCCGAC ATACCGATGG AGATCCAGGT CAAGCTGCTG
CGCGTGCTGG AGGACCGGCA GGTGCAGCGC CTGGGCGCAA GTGAAGGGCG GCGTGTGAAC
TTCCGCATTG TCGCTGCCAC TCACCGCGAT CTACGCGCAC TGATCGACAG TGGGCGCTTC
CGGCTGGATT TGTTCTACCG CTTGAGCGGC GTCGTGTTGC AGGTGCCGGC GTTGCGCCAG
CGCGTGGAGG ATATTCCGGC CTTGGTGCAG CGCTTCGCCG AGGCTTTCTG CGAGCGCAAT
GGCCTCACCT TGCCGCGCAT GGCGCCGGGC GTCATGAGCT ACCTGGCGCA GCAGAGCTGG
CCGGGCAATG TGCGCCAGCT GCGCCAGCGC GTCGAGGAGG CGCTGGTGTT CTGCGACGGC
CAGCTGCTGA GCGTCGAGAA CTTTGCCCGC CACCAGGATC TGCCGGCCCG GCCGGCGCAG
CCGCCCATGG CGCCGCCTGC GCCTGCGGCG ATGCCTTTGA GGAGCCTGGA GCACGCGGCC
ATCCTCGACG CCATTGCGCG CCATGGCGGC AACAAGAAGC GTGCGGCACA GGAGCTGGGC
ATCTCGCGCT CCTACCTCTA CAAGGTATTG GCGGGCGGCT GA
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| Protein sequence | MSFLWTQTVD TEDNMSAKNT SQIPMQTVFL SEQRLGVLVW QRGEPAPVAR LGLARDPLLC
AAVAEKRAAR EPGPGTLFHV DVPGGRGASA RYAVVALGDE AVEVALVRPA DASAALIDFV
ASVPFAFAIL NMFLTNPYQA ITVADHEGLM RYISPVHEKF LGLAPGAAMG RKAEEVIPNS
RLPQVARSGK AEIGEMLQLG PGVTRIVNRM PVFEGGALVG AVGQVSFSGM PALNRMQQRL
NQLHDEVQHY KRELHQLKRT PSPGAMVGSS APMQRLAREI DAVAPLDVPV LILGESGTGK
ELVAQALHAR GRDAQAPLVS LNLAALPATL IEAELFGYEA GAFTGGKKQG QPGKLEQAEG
GTLFLDEVAD IPMEIQVKLL RVLEDRQVQR LGASEGRRVN FRIVAATHRD LRALIDSGRF
RLDLFYRLSG VVLQVPALRQ RVEDIPALVQ RFAEAFCERN GLTLPRMAPG VMSYLAQQSW
PGNVRQLRQR VEEALVFCDG QLLSVENFAR HQDLPARPAQ PPMAPPAPAA MPLRSLEHAA
ILDAIARHGG NKKRAAQELG ISRSYLYKVL AGG
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