| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3159 |
|---|
| Symbol | |
|---|
| ID | 7383381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3375929 |
|---|
| End bp | 3377239 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643656475 |
|---|
| Product | D-amino-acid dehydrogenase |
|---|
| Protein accession | YP_002554592 |
|---|
| Protein GI | 222112328 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGA TCGTTCTGGG CGCCGGCGTC GTCGGCACCA CCTCTGCGTA CTTTCTCCAG
CAACTCGGCC ACGAGGTCAC CGTCATCGAC CGGCAGGCTG TGCCCGGTGC GGAAACCAGC
TTCGCCAACG GCGGCCAGAT CTCGGTCAGC CACGCCGAGC CCTGGGCCAA CCCCGGCGCG
CCGCTCAAGG TGCTGCAGTG GCTGGGCAAA GAGGATGCGC CGCTCTTGTT TCGCCTGCGC
GCGGACATGC GCCAGTGGCT TTGGGGCCTG CAATTCCTGC GCGAATGCAC GCCCGCGCGC
ACGCGCCACA ACATCGAGCA GATCGTGAGC CTGGGCAGCT ACAGCCGCAG CACGCTGCAG
CAACTGCGCG CCGACACGGG CCTGCAGTAC GACCAGCGCA CGCAGGGCAT CCTGCACTTC
TACACCAGCA CCCAGGAGGT CGACGCCGCG CTGGCGCCCG CCGAGCAGAT GCGTGCGCTG
GGCTGCCACC GCCGCGTGGT GGACGCGGAC GAGGCCGTGC GCATCGAGCC AGCCCTGGCC
CACGTCCGCC CGCAGTTGGC GGGCGCCACC TACACGGCGG AGGACGAGTC CGGCGACGCC
CACCTGTTCA CGCGCGCGCT GGCCGGCGTG GCCCAGGCCG CGGGCGTGCA ATTCCGCCTG
GGCTGCCACA TCACCGCGCT GCACCCGGCG GGCGGCGCCA TCGACCATGT GGAGATCACC
AACGAGGCCG GCGGCTACGA GCGCGTGCGC GGCGACGCCT ACGTGCTGGC GCTGGGCGCA
TTCAGCCCGC TGCTGGCCCA GCCCCTGGGC CTGCGCCTGC CCATCTACCC GGCCAAGGGC
TATTCGGTGA CGCTGCCGGT GCGCGACGCG GCCGCCGCCT ACCAGGTGAG CCTGACGGAC
GATGAGTACA AGCTGGTCTT CTCGCGCTAC ACCAGTGCCC AGGGCGACCG GCTGCGCATC
GCGGGGACGG CCGAGCTCAA CGGCTACGAG CGCGCACTGA ACGCCGTGCG CTGCGAAGCC
ATCGTGCGGC GCGTGGAGCA GCTCTTTCCC GGCGCGGGCG ATGCGAGCCA GGCGCAGTTC
TGGAGCGGCC TGCGCCCCGC CACGCCGAGC AACGTGCCGC TGATCGGCAA GACGCGCTAC
GGCAACCTGT TCCTGAACAC CGGCCACGGC ACGCTGGGCT GGACCCACGC CTGCGGCTCT
GGCAAGTCCA TCGCGCGCAT CGTGAGCGGG CTGGAGCCGG AGCTGGACTT CGCGTTCTGC
GGCCTGCCGC GCCCTGCTGC GGCGCCCCGC CCCGCCGTCA TCGGCGTTTG A
|
|---|
| Protein sequence | MRVIVLGAGV VGTTSAYFLQ QLGHEVTVID RQAVPGAETS FANGGQISVS HAEPWANPGA
PLKVLQWLGK EDAPLLFRLR ADMRQWLWGL QFLRECTPAR TRHNIEQIVS LGSYSRSTLQ
QLRADTGLQY DQRTQGILHF YTSTQEVDAA LAPAEQMRAL GCHRRVVDAD EAVRIEPALA
HVRPQLAGAT YTAEDESGDA HLFTRALAGV AQAAGVQFRL GCHITALHPA GGAIDHVEIT
NEAGGYERVR GDAYVLALGA FSPLLAQPLG LRLPIYPAKG YSVTLPVRDA AAAYQVSLTD
DEYKLVFSRY TSAQGDRLRI AGTAELNGYE RALNAVRCEA IVRRVEQLFP GAGDASQAQF
WSGLRPATPS NVPLIGKTRY GNLFLNTGHG TLGWTHACGS GKSIARIVSG LEPELDFAFC
GLPRPAAAPR PAVIGV
|
|---|
| |