| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2542 |
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| Symbol | |
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| ID | 7384813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2706047 |
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| End bp | 2707159 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643655850 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002553977 |
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| Protein GI | 222111713 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACG CCTCCCCCTT CATCAGCCAA GCGCTTGGGC TTGCCGCCCA GGCGCTTTTT
CTTTCCAACC CCAATCCGCG CGTGGGCTGC GTCATCACCA GCGACGCGGG TGCCGTGCTG
GGCCAGGGCT TCACCCAGCA GGCCGGCGGC CCGCATGCCG AGGTGATGGC GCTGCGCGAC
GCGGCGGCCC GTGGCAATGA CGTGCGCGGG GCCACGGCCT ATGTGACGCT GGAGCCCTGT
GCGCACCAAG GGCGCACCGG TCCCTGTTGC GATGCGCTGA TCCAGGCCGG CATAGCGCGC
GTGGTGGCGT CGGTGGCCGA CCCGAACCCG CTGGTGGCGG GCCAGGGCTT TGCACGGCTG
CGTGCGGCGG GGGTCGCCGT GGAGGCGGGG CCCGGCGCAG CGGAAACACG CGAACTGAAC
ATTGGCTTCT TCAGCCGCAT GGTGCGCGGC ATGCCCTGGG TGCGCATGAA GGCCGCGGCC
TCGCTGGATG GAGTGACGGC CTTGGGCAAT GGCGCCAGCC AGTGGATCAC TTCCCCCGCC
GCGCGCGCGG ATGGCCATGC CTGGCGTGCG CGCGCCTGTG CGGTGCTGAG CGGCATAGGC
ACGGTGCTGG AGGACGACCC GCTGCTCAAT GTGCGCGAGG TGGCCACCCC GCGCCAACCC
CACCTGGTGA TCGTGGACAG CCGGCTGCAG ACGCCGCCAG GCGCACGGCT GTTCGACGTG
GCGGACCGGC AGGTGCTGAT CTACGCGGCT CAAGGCGAGG CCCAGGCGGC AGAGGCCTTG
CGGGCGCGCG GCGCCACGGT GGTCGTGCTG CCCAATGCGC GGGGCAAGGT GGACCTGCCC
GCCATGCTGC GCGATCTGGC GCGGCGCAGC GTGAACGAGT TGCATGTGGA GGCCGGCCAC
AAGCTCAACG GTTCCTTCCT GCGCGAAGGC CTGGTCGATG AAATGCTGCT GTACCAGGCC
CCCCTGTTGC TGGGCAGCGG GGCCCACGGG CTGGCAAGCT GGGGGCCGTT GCAAGCCTTG
TCGGACGGGG TGCGCATGGA GTTCCACAGC GTGCGGCAGA TTGGGCCGGA CCTGCGGGTG
GTGGCCCGCG TGGCGGGGCG CGCGGACTTC TGA
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| Protein sequence | MTDASPFISQ ALGLAAQALF LSNPNPRVGC VITSDAGAVL GQGFTQQAGG PHAEVMALRD
AAARGNDVRG ATAYVTLEPC AHQGRTGPCC DALIQAGIAR VVASVADPNP LVAGQGFARL
RAAGVAVEAG PGAAETRELN IGFFSRMVRG MPWVRMKAAA SLDGVTALGN GASQWITSPA
ARADGHAWRA RACAVLSGIG TVLEDDPLLN VREVATPRQP HLVIVDSRLQ TPPGARLFDV
ADRQVLIYAA QGEAQAAEAL RARGATVVVL PNARGKVDLP AMLRDLARRS VNELHVEAGH
KLNGSFLREG LVDEMLLYQA PLLLGSGAHG LASWGPLQAL SDGVRMEFHS VRQIGPDLRV
VARVAGRADF
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