Gene Dtpsy_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2400 
Symbol 
ID7383261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand+ 
Start bp2552888 
End bp2553496 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID643655709 
ProductLipocalin family protein 
Protein accessionYP_002553837 
Protein GI222111573 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTGC TCTCGGCTTT TCTATTTTCT GTGCGGCGCG CAGTCATCCA GTCCTGCCGC 
GCAGGCCTAT GGGCGCTGTG GATGGCGGGC GTCGCCGTAA TGGCCGGCTG TGCAAACACC 
AGCCCCCCGC CGGGCGTAGA AGCGGTCACG CCATTCGATC TACAGCGCTA TCAGGGGCGC 
TGGTATGAGC TGGCCCGGCT CGACCACTCA TTCGAGCGCG GCATGACGGA TGTGTCCGCC 
ACCTACACCC CCCAGGCGGA CGGCAGCGTG CGCGTGGTCA ACCGCGGCTT TGCCGCCGCA 
TCGGGCCAAT GGCGCGAAGC CGTTGGCAAG GCGCTGTTCA CGGGTGCTCC CACCACCGGA 
TCGCTCAAGG TGTCCTTCTT CGGCCCGTTC TACGGCGGCT ACCACGTCGC GGCGCTTGAC 
CCTGACTACC GCTGGGCGCT GGTGTTGGGG CCTGATACCA GCTACTGCTG GATTCTGGCG 
CGCGACAAAC AACTGGACGC TGCGCAGCGC GATGCCATCG TGGCTCGCGC CCAGGCGCTG 
GGGGTGGATA CGCACGCTCT CATCTGGGTC ACGCACAAGC GCCAGGATCC TGCGCACCCG 
CCCCATTGA
 
Protein sequence
MYLLSAFLFS VRRAVIQSCR AGLWALWMAG VAVMAGCANT SPPPGVEAVT PFDLQRYQGR 
WYELARLDHS FERGMTDVSA TYTPQADGSV RVVNRGFAAA SGQWREAVGK ALFTGAPTTG 
SLKVSFFGPF YGGYHVAALD PDYRWALVLG PDTSYCWILA RDKQLDAAQR DAIVARAQAL 
GVDTHALIWV THKRQDPAHP PH