| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2302 |
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| Symbol | |
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| ID | 7384895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2446105 |
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| End bp | 2447064 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643655611 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002553740 |
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| Protein GI | 222111476 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTGA GCAAGACGGG CTATTACACC CACCGTGACT GCTGGAAGCA CGAGATGGGC
CCAGGACACC CCGAATGCCC GGCGCGGCTG GACGCCATCG AGGATCGGCT GCTGGTGACC
GGCGTGGCCG ATGCCTTGCA GCATTGTGAG GTACCGTTGG CCTCCCTGGC CGACATCGAG
CTGGCCCACG ACCGCATGCA CATGGCTGCG CTGCGCGGCC TGTCCGACCG TCTGATCGAG
GAAGAGGCCG CGGGCGGACC GCCCTATGTG CAGGTGGACA CGGACACCTC GATGAACCGC
CACACCTGGA CGGCCGCGCT GCGCGCCGCG GGCGCCGCAC TCGCCGCCAC CGACGCGGTG
ATGGCCGGAG AGATCGAGAA CGCCTTTTGC AGCGTGCGCC CGCCTGGCCA CCACGCCACG
CGCACCAAGG CCATGGGCTT TTGCTTCTTC AACAACGTGG CCATCGCCGC CAAGTACGCG
CTGCAGCGCT ACAACCTCAA GCGCGTGGCG GTGGTGGACT TCGATGTGCA CCACGGCAAC
GGCACGGAGG ACATCCTGGC CGGCGACCCG CGCGCGCTCA TGGTGAGCAT CTTCCAGCAT
CCGTTCTACC CGTACTGCGG GGACCAGGAG CCGGCGTCCA ACATGCTCAA CGTGCCCGTC
CCCGCCTACA CCAAGGGCAT GGAGGTGCGC GACATCGTGG ACATGGTTTG GATGCCGCGG
CTGGAATCGT TCAAGCCCGA GATGATCTTC GTGAGTGCGG GCTTTGATGC GCACCGCGAG
GACGACATGG GCCAGCTCAG CCTCAACGAG CAGGACTACG CCTGGATCAC CATGCGCGTC
AAGGATGTGG CCCGGCGCTT TGCCCGCGGC CGCATCGTGT CGTGCCTTGA GGGCGGCTAC
ATGATGGGGC CGCTGGCGCG CAGCGTGGAA GCCCATGTGC GCGTGTTGGC AGACCTTTGA
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| Protein sequence | MTVSKTGYYT HRDCWKHEMG PGHPECPARL DAIEDRLLVT GVADALQHCE VPLASLADIE
LAHDRMHMAA LRGLSDRLIE EEAAGGPPYV QVDTDTSMNR HTWTAALRAA GAALAATDAV
MAGEIENAFC SVRPPGHHAT RTKAMGFCFF NNVAIAAKYA LQRYNLKRVA VVDFDVHHGN
GTEDILAGDP RALMVSIFQH PFYPYCGDQE PASNMLNVPV PAYTKGMEVR DIVDMVWMPR
LESFKPEMIF VSAGFDAHRE DDMGQLSLNE QDYAWITMRV KDVARRFARG RIVSCLEGGY
MMGPLARSVE AHVRVLADL
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