| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2210 |
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| Symbol | |
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| ID | 7384515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2348341 |
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| End bp | 2349936 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643655513 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002553649 |
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| Protein GI | 222111385 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR00999] Membrane Fusion Protein cluster 2 (function with RND porters)
[TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATT CAACGAAAAG CAAGAAATCG GCCATCGCCA TTGCCGCCGT GCTGGTGGTG
GGCCTGGCAT TGGGCATCAC CATTCTGCGC AGTGGCAAGG TCAACCCAGG GGGAGAAGAG
CATGGCCATG CCGAGAGCGC GGCACATGCC AATGCAGAAC ATCCCGATCA GAAGGCCGAA
GAGGGGCATG CGCATGAGGC CGGGCATGAT GACAAGGAAC ACCGCGAGGG TGCAGGCCAA
AACGCTGCCC CCGCCAAGGG GCCTCATGGC GGCAAGCTGT TCGTGCAGGA CGGTTTTGGG
CTTGAGCTGA CCATATTCGA GACGGGTGTC GAACCCGAAT TCCGTGTTTA TCTGTTCAAG
GATGGCAAAC CCGCAGCCCC AAGCCAGGCT CAGGTCGCCG TGACCCTGGA GCGCCTGGGC
CGCCCTCCGG AGCTGTTCAA CCTTGCCCCA CAGCAGGACT ATCTCAAGGG TTCGGCCACC
GTTGAGGAGC CGCACTCGTT CAAGGCCGCG ATCAAGGCGC AGGCCGGCGC ACAGACCTAC
GAATTCAAGT TCGAGCAGGT AGAAGGCCGC GTTCAGATAA CGGACGAGCA ACTCCAGCGC
AATGGTGTCG AGCTGGGCGA TGCGGGGCCC GCGCGCATCC GCAGTAGCCT GCAATTGCTT
GGCGAGGTGA AGCTGAACCA GGACCGCAGC GTTTTCGTCA CCCCGCGCCT GGCGGGCATC
GTCGAGTCCG TACGCGCCAA CGCCGGTGAT CCGGTGCGCC GTGGACAGGT GTTGGCGGTG
ATTTCGAGCC AGGCGCTGGC CGACCAGCGC AGTGAGCTGC TGGCCGCACA GAAGCGCCTA
AATCTGGCCC GAACAACCTA TGAGCGCGAA AAGAAACTCT GGGAAGACAA GATCTCCGCA
GAGCAAGATT ACTTGACTGC ACGCCAGCTC TATCAAGAGG CCGAGATCGC CACCGAAAGA
GCGCGCCAAA AGCTAGCCAG CCTGGGGGCC GGTGCCACCG AGTCCACCCA GGGCCTGACG
CGCTACGAAG TGCGCGCGCC GATCGACGGA GTCATCACCG ACAAGAAGAT CAGCGTCGGT
GAGGTGCTCA AGGAGGACGG CACCATATTC CAGCTGGCCG ATCTATCGAC GGTGTGGGTT
GAGTTGATCG TCCCGGCCAA GGATGTGGGG CGGATCAAGG TGGGCGACCA GGCCCGGGTC
CAATCCGCGG CGCTGGAGGG CGAGGCGAGT GCAAAGGTGT CCTATGTGGG CGCTTTGATC
GGCGAGCAGA GCCGCAATGC CACCGCCCGA CTGGTGCTGG GCAATGCCAA GGGCCAATGG
CGCCCGGGGC TGCCGGTGTC CGTGGACCTG ACGTCGGACG AAGTCACCGT GCCGGTGGCG
GTGGCTGCAG ATGCGGTGCA GACACTGGGC AAAGGGCCGG TGGTGTTCGG CCGCTACGGC
CAGCAGTTCG AGACGCGGCC GCTGGAGCTC GGGCGCAGCG ACGGGCGCTT CACCGAGGTC
GTCAAAGGCC TGTCGGCAGG CGAGCGCTAC GCCGCCAAGA ACAGTTTTCT GATCAAGGCC
GAGCTTGGCA AGGCCGGCGC GAGCCACGAC CACTGA
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| Protein sequence | MTNSTKSKKS AIAIAAVLVV GLALGITILR SGKVNPGGEE HGHAESAAHA NAEHPDQKAE
EGHAHEAGHD DKEHREGAGQ NAAPAKGPHG GKLFVQDGFG LELTIFETGV EPEFRVYLFK
DGKPAAPSQA QVAVTLERLG RPPELFNLAP QQDYLKGSAT VEEPHSFKAA IKAQAGAQTY
EFKFEQVEGR VQITDEQLQR NGVELGDAGP ARIRSSLQLL GEVKLNQDRS VFVTPRLAGI
VESVRANAGD PVRRGQVLAV ISSQALADQR SELLAAQKRL NLARTTYERE KKLWEDKISA
EQDYLTARQL YQEAEIATER ARQKLASLGA GATESTQGLT RYEVRAPIDG VITDKKISVG
EVLKEDGTIF QLADLSTVWV ELIVPAKDVG RIKVGDQARV QSAALEGEAS AKVSYVGALI
GEQSRNATAR LVLGNAKGQW RPGLPVSVDL TSDEVTVPVA VAADAVQTLG KGPVVFGRYG
QQFETRPLEL GRSDGRFTEV VKGLSAGERY AAKNSFLIKA ELGKAGASHD H
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