| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2114 |
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| Symbol | |
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| ID | 7383049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2267449 |
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| End bp | 2268315 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643655433 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002553569 |
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| Protein GI | 222111305 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGCC TGATTTCTTC TCTGGTATTG GCGCTGGCCA TTCTGGTCGG TCTGTGGTCG
GTCTACAGCC TGTTTCGCCA GGCGCCTACC GAAGACCGTA CCTACAAGGA CAAGCCGCCG
CTGCTGTTCC GGGTGCTGTG GCCGTTGATC AATCTGCTGG CCAACAGTCT GGGCTGGGCG
CTATCGACCA AGGCCGAGGA GCGCTACACC ACCGCACTGC GCCGTGCCGG TCAGGACTAC
GCCCTGACAC CCCGACAGTT CTTTGCGGGC AAGGTGGTGT CGGCCGTGGC GGGCGCGCTG
CTGGGGGTGA TGCTGTCGGG CATGCTTGAG GGCGGTCTGT CCATCATCGT GGTGATTGCC
ATGCTGGCGT TCTTCTACCC GGATTTGTGG CTCAAGGAAA CCACCAAGCA GCGCAATCTG
GCCATCCTGA AGGCCCTGCC GTTCTTCATC GACCTGTTGA CGCTGTCGAT CGAGGCGGGC
CTGAATCTGT CGGGCGCGAT GCAACAGGCC GTGGCCAAGA GCGCCGGCGG GCCGCTGATG
GTGGAGATCA ACCGCGTACT GCGTGACGTG CGTGCCGGCA AGGCGCGCAT CGATGCCTTG
CGAGATTTTT CCGCACGCCT GGATTTCACG CCCATCACCA GCTTCGTGAG TGCGCTCGTG
CAGGGCGAGA AAACCGGCTC CAGCCTGGGC CCCATCCTGC GTGCGCAGGC CGAGCAGCGC
CGCACCGAGC GTTTCCTGCG TGCGGAGAAG CTGGCCATGG AGGCTCCCGT GAAGATGCTC
GGTCCGCTGA TTTTCTTCAT CTTCCCTTGC ACCTTCATCG TCATCGGCTT TCCGATCGCG
ATGAAATTCC TGGCGTCGGG CTTGTAA
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| Protein sequence | MLGLISSLVL ALAILVGLWS VYSLFRQAPT EDRTYKDKPP LLFRVLWPLI NLLANSLGWA
LSTKAEERYT TALRRAGQDY ALTPRQFFAG KVVSAVAGAL LGVMLSGMLE GGLSIIVVIA
MLAFFYPDLW LKETTKQRNL AILKALPFFI DLLTLSIEAG LNLSGAMQQA VAKSAGGPLM
VEINRVLRDV RAGKARIDAL RDFSARLDFT PITSFVSALV QGEKTGSSLG PILRAQAEQR
RTERFLRAEK LAMEAPVKML GPLIFFIFPC TFIVIGFPIA MKFLASGL
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