| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1982 |
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| Symbol | |
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| ID | 7382101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2118615 |
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| End bp | 2120399 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643655300 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_002553438 |
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| Protein GI | 222111174 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATT CGAATCATAG CGCGCCAAAG ACCACTTTGC AGCAAGCTCC GCAGTCTCTT
TCGCTGTGGG AGCGGTTGCG CAGGCTCCAT CCGTACTTCG GTCACCAGCG GCTGGCATGG
ACCATGGCGG TAGTGGCGAC GATCGTCGCG GCCGCTACCG AGCCATTGAT TCCCGCGCTT
CTCAAACCAT TGCTGGACCA GGGTTTTACA GAAGGATCGC TGGAGCTCTG GATGGTTCCC
GTGGCCATCA TCGGCGTCTT CCTGGTTCGT GGGCTGGCCC AGTTCACGGG ACAGTACGCC
CTCACGCGCA TCGCCAACGA GGGCATGCTG CGCCTGCGCA CGGCGCTGTT CGAGCGGCTG
CTGGCTGCGG ACATGGGGCT TTTCCATCGC CAGTCGGCCA GCGCACTGTC CAACACCGTG
GTGTATGAGG TGCAGACCGG GTTCACCTCG CTGGTCCAGG CGCTGCTGGG CCTATCGCGC
GACGGTTTCA CGCTGGTCGC CCTGCTGGGT TATCTCATCT ACCTGAACTG GCAACTCACG
CTGATCGTGG CCGTGCTGGT ACCGGGGGTG GCCTGGGTGA TGAAGACGCT CTCGCGGCGC
CTGTACAAGA TCACCAAGAG CAGCCAACAG GCCACCGACG ACCTGGCCTA TGTGGTCGAA
GAGAACGTAC TGGCCCACCG TGTGGTACGC CTGCACGGCG CCCAGACCGA GCAGGCCGCG
CGCTTTGACA CGCTGAGCCA GCGCCTGCGC CGCCTGGCCA TCAAATCCAC GATCGCCTCG
GCCGCCATGA CGCCCACCAC GCAGCTGCTG TCCGCGGGCG CGCTGTCCAC CGTGATCTGC
ATCGCCCTGT GGCAAAGCCA TGGCAACGGT GCCAAGGACG TGACCGTGGG CGGTTTCGCC
TCGTTCATCG CGGCGATGCT GATGTTGATA GCGCCCATCC GCCGCATGGC CGACATCGCC
AACCCCATCA CGCGCGGCGT GGCGGCGCTG GAACGGGGCC TGGCCCTGCT GCACGAGGCG
CCGGCCGAGA CAGGCGGCAC GCACACCGCG CAGCGCGCCC AGGGGGCGAT TGCCCTGCGC
AACGTGACCG TGTCCTTCCG GCCCGACCAG GCGCCCGCAC TGGACGCCGT GAGCCTGGAC
ATCCGCCCGG GCGAAGTGGT GGCGTTCGTC GGCCCCTCCG GTGCCGGCAA GACCACGCTG
GTGAACCTGC TGCCGCGCTT TCTCAGCCCC AGCAGCGGCC AGGTGCTGCT GGACGGCGTG
GCGACCGACC AGTGGGCGTT GCCCAGCCTG CGCGCGCAAT TCGCCATGGT GAGCCAGGAC
GTGGTGATGT TCAACGACAG CGTCGCCGCC AACGTGGCGC TGGGCGCTGC CGTGGACGAG
CAACGTGTGC AGCACTGCCT GGACGCAGCG AACCTCGCCG AGTACGTGGC CAGCCTCCCG
CAGGGTATGC ACACCGTGGT GGGACACAAC GCGACGCAGC TGTCGGGCGG ACAGCGGCAG
CGGCTGGCCA TCGCGCGGGC GCTCTACCGC GACGCTCCGG TGCTCATCCT CGACGAGGCC
ACCTCGGCAC TGGATACCGA GTCCGAACGC CTGGTACAGC AGGCCCTGCA GCGTCTCATG
CAGGGGCGCA CCACGCTGGT AATTGCCCAC CGTCTCTCCA CCATCGAACA CGCGGACCGC
GTGGTGGTCA TGGAGCAAGG GCGCATCGTC GAGCAGGGCC CCCACGCGGA GCTGTTGGCC
CGGGGCGGCC TGTACGCGCG CCTGCGCGCA CATGGCGGCG CGTGA
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| Protein sequence | MQDSNHSAPK TTLQQAPQSL SLWERLRRLH PYFGHQRLAW TMAVVATIVA AATEPLIPAL
LKPLLDQGFT EGSLELWMVP VAIIGVFLVR GLAQFTGQYA LTRIANEGML RLRTALFERL
LAADMGLFHR QSASALSNTV VYEVQTGFTS LVQALLGLSR DGFTLVALLG YLIYLNWQLT
LIVAVLVPGV AWVMKTLSRR LYKITKSSQQ ATDDLAYVVE ENVLAHRVVR LHGAQTEQAA
RFDTLSQRLR RLAIKSTIAS AAMTPTTQLL SAGALSTVIC IALWQSHGNG AKDVTVGGFA
SFIAAMLMLI APIRRMADIA NPITRGVAAL ERGLALLHEA PAETGGTHTA QRAQGAIALR
NVTVSFRPDQ APALDAVSLD IRPGEVVAFV GPSGAGKTTL VNLLPRFLSP SSGQVLLDGV
ATDQWALPSL RAQFAMVSQD VVMFNDSVAA NVALGAAVDE QRVQHCLDAA NLAEYVASLP
QGMHTVVGHN ATQLSGGQRQ RLAIARALYR DAPVLILDEA TSALDTESER LVQQALQRLM
QGRTTLVIAH RLSTIEHADR VVVMEQGRIV EQGPHAELLA RGGLYARLRA HGGA
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