Gene Dtpsy_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1800 
Symbol 
ID7382567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1916001 
End bp1917209 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content67% 
IMG OID643655117 
Producttryptophan synthase subunit beta 
Protein accessionYP_002553257 
Protein GI222110993 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.755305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCCT CCACCGACTT CGCCCCCATG CCCGATGCCG CCGGCTTCTT TGGCCCCTAC 
GGCGGGCAGC TTGTGCCGCC GCACCTGAAA GCCGCCATGG ACGACATCGC CGCGGCCTAT
GCCGAGATCA CGCAGCGCAA GGACTTTCAG GACGAGCTGG CACAGCTGTT TGCCGATTAC
GTGGGCCGGC CCAGCCCGAT CTTTCATGCC AAGCGGCTTT CGGGCCTGCT GGGCGGCGCG
CAGATCCACC TCAAGCGCGA GGACCTGAAC CACACCGGCG CGCACAAGAT CAACCACTGC
CTGGGCGAGG CGCTGCTGGC CAAGTTCATG GGCAAGAAAA AGGTAATCGC CGAGACGGGC
GCCGGCCAGC ACGGTGTGGC GCTGGCCACG GCCTGTGCGC TGGTGGGCAT CCCGTGCGAG
ATCCACATGG GCCAGGTGGA CATCGAGAAG GAGCACCCCA ACGTCACCAA GATGCGCATC
CTGGGCTGCA AGCTGGTGGC GGTGACGCGC GGCGCGGCCA CGCTGAAGGA GGCGGTGGAC
AGCGCCTTCG AAGAGTACCT GACCAACCCC ACCGACTACC TCTACGCCAT CGGCTCGGTG
GTGGGCCCGC ACCCGTTCCC GATGATGGTG CGCGACTTCC AGAGCATCAT CGGCCGCGAG
GCGCGCGAGC AGTTCCAGGC CAGGCACGGC CGCCTGCCCG ACTACGTGAC CGCCTGCGTG
GGCGGCGGCA GCAATGCCAT GGGCATGTTC ACCGCCTTCC TGGGCGATAC CGATGTGAAG
CTGGTGGGCG TGGAACCCTC GGGCGAAGGC ACCGACAAGC CCGGCCGGCA CGCGGCCACG
CTGAGCATGG GCCAGCCCGG TGAGATCCAC GGCATGAAGT GCTATGTGCT GGAGGATGCG
CCGGGCGTGC CTGCCGCCGT GCACAGCATT GCCTCGGGCC TGGACTACCC CGGCGTGGGC
CCGCAGCACA GCTATCTGAA GGACATTGGC CGCGTGCAGT ACGAAGCCGT GACCGACAAG
GAATGTCTGG ACGCGTTCAT GCAGCTGTCG CGCGTGGAAG GAATCATCCC CGCGCTGGAG
AGCGCCCATG CCGTGGCCTG GGCCATCCGC GTGGCGCCCA CGCTGCCCCA GGACCAGCAC
ATCCTGGTCA ACCTGTCGGG CCGCGGCGAC AAGGATGCGG ATTACGTCGC CAAGGTGCTG
GGGCTTTGA
 
Protein sequence
MTASTDFAPM PDAAGFFGPY GGQLVPPHLK AAMDDIAAAY AEITQRKDFQ DELAQLFADY 
VGRPSPIFHA KRLSGLLGGA QIHLKREDLN HTGAHKINHC LGEALLAKFM GKKKVIAETG
AGQHGVALAT ACALVGIPCE IHMGQVDIEK EHPNVTKMRI LGCKLVAVTR GAATLKEAVD
SAFEEYLTNP TDYLYAIGSV VGPHPFPMMV RDFQSIIGRE AREQFQARHG RLPDYVTACV
GGGSNAMGMF TAFLGDTDVK LVGVEPSGEG TDKPGRHAAT LSMGQPGEIH GMKCYVLEDA
PGVPAAVHSI ASGLDYPGVG PQHSYLKDIG RVQYEAVTDK ECLDAFMQLS RVEGIIPALE
SAHAVAWAIR VAPTLPQDQH ILVNLSGRGD KDADYVAKVL GL