| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1761 |
|---|
| Symbol | |
|---|
| ID | 7385325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1873131 |
|---|
| End bp | 1873676 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643655077 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002553218 |
|---|
| Protein GI | 222110954 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.247672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTTG CCGACTACCG CTTGGCCTTC GAGATGGCAC CCGTGGGCCT GGTGATTTCG
CGCAACCGCA CCATGGTGGA TTGCAACCGA CATGTGTGCG AGATATTCGG CGCCTCGCGC
GAACTGCTCA TCGGCCAGTC GTTCCAGATC CTCTACCCCA GCCCGGACGA ATATGAGCGG
CTGGGCGCAC GCATGGCGCC CATCCTGAAC GCACGCGGCC ACTATGCCGA CAACCGCATC
ATGAAGCGCG CCAACGGCGA AACCTTCTGG TGCCACGTGT CCGGTCGCGC GCTGGATCGC
AACGATCCGC ACGCCTCGGG CATCTGGAGC TTCGAGGACC TGAGCGCGCA GCGCCCCGTG
CGCGCCGAGC TGACGGCGCG CGAACGCGAG GTGGCCGCGC GGCTGCTGGA CGGCATGACC
TCCAAGGAGA TCGGCCGCGC GCTGGACATC AGCCACCGCA CGGTGGAGAT CTACCGCGCG
CGGCTCATGC GCAAGTACGG CGCGTCCACG GCCGCGGACC TGGTGCAGAA GCTGTTGGCG
GGATAA
|
|---|
| Protein sequence | MNVADYRLAF EMAPVGLVIS RNRTMVDCNR HVCEIFGASR ELLIGQSFQI LYPSPDEYER
LGARMAPILN ARGHYADNRI MKRANGETFW CHVSGRALDR NDPHASGIWS FEDLSAQRPV
RAELTARERE VAARLLDGMT SKEIGRALDI SHRTVEIYRA RLMRKYGAST AADLVQKLLA
G
|
|---|
| |