Gene Dtpsy_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1426 
Symbol 
ID7382679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand+ 
Start bp1496982 
End bp1497587 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content73% 
IMG OID643654742 
Product2',5' RNA ligase 
Protein accessionYP_002552888 
Protein GI222110624 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0723245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCTC ACCAACTGCC GCTCGCCGGC GTGGAGCCCG ATGCGCCACG CCCCAACCAC 
CATCTTTTCT TTGCCGTGCT GCCCGAGCCC GGGGCGGCGC AGGCTGCGGC CGATCTGGCG 
CAGACGCTGA TTGCGCGGCA CGACCTGCAG GCGCAGGTGC GCGCGCAGCG CCTGCACGCC 
ACGCTGCTGT CGCTGGGGTG GGAGCCTGCG CTGTCGCCCC GGCATCTGCA GTGGGCGCGC 
GACGCGGCGC AGCAGGTGCG GGCGAGGGCG TTCTCGTTGC GGTTCGATCG GGTGTTGAGC 
TTTCGCCGCG CGCCGCAGGC CAAGCGGCCC TGCGTGCTCT GCGGCCCCGC CGACGGGCAG 
CAGGGCTTCA TCGCGTTGTA CGAGGCGCTG CACGCGGCGC TGTGGTCGCA GGTGCGGGGG 
CTGGACGGCG TGCCCCCTGC GCCGCACATC ACCCCGCACA TGACGCTGTG CTACAGCCGC 
CAGGCCGTGC CCGAGCAACC CGTGCCGCCG CTGGAATGGA CGGTGCGCCG CTTCGTGCTG 
CTGCACAACC TGCGCGGCTC GCCCGGCCCT TACGAGGTGC TGGGCGAGTG GCCGCTGGCG 
GATTGA
 
Protein sequence
MDAHQLPLAG VEPDAPRPNH HLFFAVLPEP GAAQAAADLA QTLIARHDLQ AQVRAQRLHA 
TLLSLGWEPA LSPRHLQWAR DAAQQVRARA FSLRFDRVLS FRRAPQAKRP CVLCGPADGQ 
QGFIALYEAL HAALWSQVRG LDGVPPAPHI TPHMTLCYSR QAVPEQPVPP LEWTVRRFVL 
LHNLRGSPGP YEVLGEWPLA D