| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1363 |
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| Symbol | |
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| ID | 7382615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1424806 |
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| End bp | 1425456 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643654681 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002552827 |
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| Protein GI | 222110563 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00149286 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGC CCCCCGCCCC ACGCCCGCGC CTGGCGCTGC GCCGCCCCGC GGCCGCGCCA
GCACCCGCCC CCCAGCACGC GGCGCGGCTG CTGCGCTTCA ACAAGCCCTA TGGCGTGCTG
AGCCAGTTTA CGCCCGAGGG GCGCTGGCGC GGGCTCCAGG ACTTCATCGA CGTGCCCGGC
GTCTATGTGG CGGGGCGGCT CGATGCCGAC AGCGAGGGGC TGCTGCTGCT CACCGACGAC
GGGGCGCTGC AGGCACGCAT CAGCGATCCG CGCCACAAGA TGGAGAAGAC CTACTGGGTG
CAGGTGGAGG GCATTCCTGA CGAGGCCGCG CTGCAGGCCC TGCGCCAGGG CGTGCAGCTC
GGCGACGGCC CCACCCTGCC CGCACGCGTG CGCCGGCTGG AGCCGCCGCC CGCCCTCTGG
GAGCGCGATC CGCCCATCCG CGTGCGCCAG AACATTCCCG ACTGCTGGAT CGAACTCATC
ATCCGCGAAG GCCGCAACCG CCAGGTGCGC CGCATGACCG CCGCCGTGGG CCACCCCACG
CTGCGGTTGG TGCGCGCGGC CATCGGCCCC TACGCCCTGG ACGGGCTGGA GCCGGGCTGC
TGGCAGCCCG CCAGCCCGCC CTCGCCAGTG CCGCACCACC GCAAAAAGTA G
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| Protein sequence | MSTPPAPRPR LALRRPAAAP APAPQHAARL LRFNKPYGVL SQFTPEGRWR GLQDFIDVPG
VYVAGRLDAD SEGLLLLTDD GALQARISDP RHKMEKTYWV QVEGIPDEAA LQALRQGVQL
GDGPTLPARV RRLEPPPALW ERDPPIRVRQ NIPDCWIELI IREGRNRQVR RMTAAVGHPT
LRLVRAAIGP YALDGLEPGC WQPASPPSPV PHHRKK
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