| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1336 |
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| Symbol | |
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| ID | 7382425 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1397836 |
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| End bp | 1401677 |
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| Gene Length | 3842 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 66% |
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| IMG OID | 643662993 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGCA AAGACCCGCT GGCGGCGTAC AAACAAAAGC GCAACTTTGC CGTGACGCCA
GAGCCCGCGG ACGGCGGAGC GCAGTCGCAG GCGCTGCAGT ACGTGATCCA GAAGCACTGG
GCCAGCCGCC TGCACTATGA CCTGCGCCTG GAGCTGGACG GCACCATGAA GAGCTGGGCC
GTACCCAAGG GCCCCAGTTA CGACCCGGCG GACAAACGCA TGGCCGTGCA GGTGGAAGAC
CACCCGATTT CCTACAACCA ATTCGAAGGG CAGATCCCGC CGCGCCAATA CGGCGCGGGG
CGGGTCATCA TCTGGGACCG CGGCTATTGG GTGCCGCAGG GCAATCCGCG CGAAGACTAC
CGCAAGGGGA AGCTCAAGTT CGAGATCCAC GGTCACAAAT TGCATGGTCA CTGGACCCTG
GTGCGTATGC ATGGCCGGGA CGACGATAAG CAGCCCCCCT GGCTGCTGAT CAAGGAGCGC
GACGGGCTGG AGCGTGCGGC CGAGGAGTTC AACGTGGTGG ACGAAATGCC CGACAGCGTG
GCAGACCAGC CGCCGGTTGC GCCACCAGCG CGCGCATTCG CTCAGAGGGC CGGGCCCGCG
CAGATTCAGC CTCCCACGGC AGCGGCGGTG CCGTGGACAT CCGCGCCCAC GGCACCGCTG
CCTGACCAGC TATCCCCGCA ACTCGCCACG CTGGTGGACG GACCGCCGGC CGACCTTTCG
CAGTGGCTGT GGGAGCTCAA GTTCGACGGC TATCGCATGC TGGCGCGGGT TCAGCGCGGC
AAGGCACGGC TGTACACCCG TAACGGCAAC GACTGGACCT CGAGGATGCC CGCCCTGGCG
CAAGCGCTGG CCGCCTTGCC GCTGTCCTCT GCATGGATCG ACGGCGAGGT GCTGGTGCTG
GACGCCCAGG GTGTCCCCGA CTTCCAGGCG CTGCAGAACG CGTTTGACGG GCGATCGACC
GACGCGCTGG TCTTTTACGC CTTCGACTTG CCTTTTGCGC ACGGGCGCGA TCTGAGGCAA
CTGCCCCTCG CTGAACGGCG TGCGCTGCTG CGCAGCGTGC TGCAGCCAGC CTCCTCAGAC
CGTGTGCGGT TCAGCGAAGC GTTCGAAGCC CGGCCCGCGG ACCTGGTGGC CTCGGCCTGC
CGGCTGGGAT TTGAAGGGGT GATCGGCAAG CGCAAGGACA GCGTGTATGC CTCGCGCCGC
AGCACGGACT GGATCAAGCT CAAGTGCAGC CATCGGCAAG AGTTCGTCAT CGGCGGATAC
ACGGACCCGC AGGGCTCACG CACAGGGATC GGTTCACTGC TGCTGGGCGT GCATGACGAG
GGCGGTGCCC TGCGCTATGC CGGCAACGTG GGTACGGGTT TCAGCGAGCG CGTCCTCGCG
GACCTGGCCC GGCGGCTAGG CGCTTTGCGC ACCCAGGGCA GCCCGTTTGC CCAGCCGCGC
TCCATCCCCC GCAAGGTGCA TTGGGTGAGG CCCACGCTGG TGGCGGAGGT TTCCTTCGCC
GAATGGACGA AAGAGGGCAA GGTGCGCCAC GCCGTGTTCC GCGGGTTGCG CGACGACAAG
CCCGCCGCCG CCATCGTCCA CGAGGAGCCT GCGCACCTGC AGGGGGCTGC GCCCAGCCGC
GCCGCGCGCG TGGGGGGGCT GCAGGTGACA AGCCCGGCGC GCGTGGTGGA TCCCTCCACC
GGGTTCACCA AGCTTGATCT GGTGCGGTAC TACGCCACGG TAGCGCCCCT CATGTTGCCC
CACCTGCAGG GGCGGCCGGT GTCCCTGCTG CGGGCGCCGC AAGGTCTGGA GGGCGACCTT
TTCTTTCAAA AGCACCTGGA CACAGGGGCA TTGGACGGGG TGAGTGCGCT GTCACCCGAC
CTGGATCCTA GCCACCCGCC GCTGCTGGAA GTGGCCACGG CGCAGGGCCT GCTGTCGGCC
GCGCAAATGA ACACCGTGGA GTTTCACACA TGGAATGCTC GCAAGGACCG GATTGAGCGG
CCCAACCGCA TCACCTTCGA CTTGGATCCG GGCGAGGGCG TGCCGTGGGC GCACGTGCAA
GAGGGCGCAG CGCTCGTGCG CTTGATGCTC ACCGAGCTGG GACTGCCATC GTTCCTTAAC
AGGCCGTTGA AAAATCCCCC TCCGACGCCC GCGTTCGCCG CTACGATCTG AAGCCATAGG
TGAACGACCC AGACGAGGAC GATGAGAGGC AACCAAGACT TCCAGGGGGC GATGTTCAGC
TACATCAGCC TTGAAGAGCG CGTGCCGCAG GCACACCCGC TGCGCAAGTT GCGCGCGGTG
GTTGATGCGC TGCTGGCAAC CATGAACCGC GAATTCGAAG CGGTGTACGC CCGCCGTGGC
CGCCCATCGG TGCCACCGGA GATGCTGCTC AAGGCCTTGC TGCTGCAGAT CCTGTTCTCC
ATCCGCAGCG AGCGCCAGTT GGTCGAAGCG ATCAACTACA ACCTGCTGTA CCGCTGGTTC
GTAGGCCTGA ACATCGAAGA CAAGGTCTGG GACCACTCCA CTTTCAGCGC CAACCGCGAA
CGTCTGTTCA ACGAAGACCT CGCCCGCACC TTCTTCGAGC GCGTCAAGCT CAGTGCCCAG
TGGGGCAAGC TCGCCAGCGA CGAGCACTTC AGCGTGGACG GCACGCTCAT TGACGCCTGG
GCCTCGCACA AGAGCTTCAA GCGCAAAGAT GACGACAGCG GCACGCCGCC TGGGCGCAAC
CCCGAGGTGG ACTTCAAGGG GCAGGAGCGC TGCAACGACA CCCACAAGAG CACCACGGAC
GCCGATGCCC GGCTGTTCAA GAAGAGCCGG GGCGACAAAT CCCGCCTGTG CCACATGGGA
CACATCCTCA TGGAGAACCG CAACGGGCTG ATCGTGGATG TCGAGATCAC CCATGCCAGC
GGCACGGCCG AGCGCGAGGC GGCACTGGCC ATGTTGGAGC GTCGGGGCAA CAGGAACAAA
CGGGCCACGG TCGGTGCCGA CAAGGGCTAC GACAGCAAGG CCTTCATCAA AGGCTGTCGC
AAGCTCAAAG TCACGCCCCA CGTGGCGGCC AAGGACAAAC ACTCGGCGGT GGATGCGCGA
GTGACACGGC ACGAGGGCTA CAAGACCAGC CTGAAGGTGC GCAAGCGCAT CGAAGAGGCC
TTTGGCTGGA TCAAGACCGT CGGTGGTCTG GCAAAGACCA AGCTGATCGG TCAGGCCAAG
CTCACGGGCC AGGCGCTGCT GTGCTTTGCC ACCTACAACC TTGTGCGAAT GGGCAGCATC
GGCGGCTGGT GGAACGCGCA TCATGCGTGA GCCCAGGGAT ACGTGCGCCC GAAATGGGCG
GGAGGGCCTG CAAACCGGCC AGATTGGCCG TTGCAATCGC TGCGCAGACG CGTCTGGGCA
GCTCATGTCT TCGAACTCAG CGTCCCTGAT GCGTTCGAAA AGCACTTTTT CAACGGCCTG
TTAAGACCAG CGGCGGCAAG GGGCTGCATG TGGTGGTGCC CATCAAGCGA CTGCACGGCT
GGGATGCCGT GAAAGACTTC AGCCAAGCCG TGGTGCAGCA TCTGGCGCGC ACCCTGCCGC
AGCGCTTCGT GGCCAAGAGC GGGCCCCGCA ACCGCGTGGG AAAGATCTTC GTGGACTACC
TGCGCAATGG CTTTGGCGCC ACCACGGCCT GTGCGTGGAC GGCGCGCGCG CGGCCGGGCA
TGGGCGTGTC CGTGCCCGTC GCCTGGCAGG AACTGGACGC GCTCACGGGT GGCGCCCACT
GGACGGTACA GACCGTGGAC CGGCGCTTGA AGACGGGCAA TGGCCCCTGG TCGGGCTATG
ACGAGGCTGC CGTGTCCATC GGGCCGGCGA TCAAGGCGCT TGGGGAAAAA CGCCACCTAT
AG
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| Protein sequence | |
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