| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1103 |
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| Symbol | |
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| ID | 7382918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1156578 |
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| End bp | 1157315 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643654424 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002552580 |
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| Protein GI | 222110316 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTTC AGGACATTCT CTATTCGCAA GGATTCGGCA CGCGCCGCAT TTGCGCCGGC
TTGATTCAGC AGGGCAGAGT TGCCATGCAT GCGACAGGCA CCCTAGAGCC CACGATCTGC
CAAGACGCGA CGCAGGATAT TGATGTCGAA AGTTTGGTGT TGCGCGTTCA AGGAGTGGAT
TGGCCATACC AACCCAAGGC CTATGTCATG CTCCATAAGC CTGCAGGAAC CGAGTGTTCG
CAGAAGCCAT CGGCCTATCC CAGCATCTAC ACGTTGTTGC CCGCTCCGCT TAGGCAGAGG
CCCAGCAAGG GTGCTGTGGA TGGTGTGCAG GCCGTGGGGC GCTTGGACCA GGACACCACC
GGTTTGCTGT TACTCAGTGA CGATGGGCAA TTCATCCACC GCATGAGTTC GCCCAAAAAG
CATGTGCCAA AGGTGTACCG TGTGACTGCC AAGCATCCCG TGACCAAGGA ACAGGTCGAC
CGCTTGCTGG CAGGTGTGGT GCTCGATGAT GATCCACGCC CTGTGCGTGC GGCTGCCTGC
GCGCTAGTTG ACGCGCATGT GCTTGACCTG ACCCTGACGG AAGGGAAGTA CCACCAAGTG
AAGCGCATGA TCGCCGCGGT AGGCAATCGG GTGGAAGCCT TGCATCGGTC GCACATCGGC
CGTTTGGCAT TGCCGGCGGA TATGCAGCCG GGGGAGTGGC GTTGGCTCGG CGAAGAGGAA
CTCGCCCAGC TGCGGTAG
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| Protein sequence | MQLQDILYSQ GFGTRRICAG LIQQGRVAMH ATGTLEPTIC QDATQDIDVE SLVLRVQGVD
WPYQPKAYVM LHKPAGTECS QKPSAYPSIY TLLPAPLRQR PSKGAVDGVQ AVGRLDQDTT
GLLLLSDDGQ FIHRMSSPKK HVPKVYRVTA KHPVTKEQVD RLLAGVVLDD DPRPVRAAAC
ALVDAHVLDL TLTEGKYHQV KRMIAAVGNR VEALHRSHIG RLALPADMQP GEWRWLGEEE
LAQLR
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