| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1091 |
|---|
| Symbol | hisS |
|---|
| ID | 7382900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1138984 |
|---|
| End bp | 1140273 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643654406 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_002552568 |
|---|
| Protein GI | 222110304 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGC TGGTTGCCAT CAAGGGCATG AACGACATTC TTCCGCCCGA TTCGGCGCGC
TGGGAATGGC TGGAGGACAA GGTGCGCACC CTCATGGCGC GCTACGCTTA TCGCAACATC
CGCACGCCCA TCGTCGAGCC TACGCCGCTG TTCGTGCGCG GTCTGGGCGA AGTCACCGAC
ATCGTCGAGA AGGAGATGTA CTCCTTCGAG GACCGGCTCA ACGGTGAACA GCTGACGCTG
CGCCCCGAGG CAACGGCGGG GGTGGTGCGT GCGGTGGTAG AGCATTCCAT GCTCTACGAC
GGCGGCAAGC GCCTGTACTA CATGGGGCCC ATGTTCCGGC ATGAACGGCC ACAGCGCGGC
CGCTACCGCC AGTTCCACCA GATCGGTGCC GAGGCGCTGG GCTTTCCCGG CGCGGAAGCC
GATGCCGAGA TCATTCTGCT GGCGCATGCG CTGTGGGCGG AACTGGGGCT GGAGAACGTG
CGGCTGGAAT TGAACAGCCT GGGGCAGCCC GACGAGCGCC GCGCCCACCG CGCGGCGCTG
ATCGCATACC TGGAGCAGCA CATGGATGTG CTCGACGAGG ATGCGCGCCG CCGCCTGCAC
AGCAATCCGC TGCGCATTCT CGACACCAAG AACCCCGCGA TGCAGGCGCT GGTGGAAGGC
GCCCCGCGGC TCATCGACTT TCTAGGCGAG GCGTCGCTGC AGCATTTCGA GACCGTCAAG
GCGATCCTGG ATGCCAACGG CGTGGCCTGG AGCCTCAACC CCCGCCTGGT CCGCGGGATG
GACTATTACA ACCTCACGGT ATTCGAGTTC GTGACGGACC AACTGGGTTC GCAGGGCACG
ATCTGTGGTG GTGGCCGTTA CGACTACCTG ATCGAGCAGA TCGGCGGCAA GTTCGCTCCG
GCCGTGGGCT GGGCGCTGGG GGTGGAGCGC GTGCTGGAGT TGCTCAAGGA GCAGGAGACG
CAAGTGGCCC GACCAGCTGC CGATGCCTAT GCCGTAGTGC CCGACGCGTC TGCCCTGCCG
GTGGTCATGG CTGCCTTGCA GCGGCTGCGT GCGCAGGGGG TGTCGGTGCA GATGCACAGC
CCCACCGCCG CAGGCGAGGG CATGGGCAGC ATGAAATCCC AGTTCAAGAA GGCGGACGCC
AGCGGCGCAC GCTATGCACT GGTCTTCGGC GCCGACGAAT TGGCCCGCGG GGCCGTGACC
GTCAAGCCGC TGCGGGATAG CGGCGAGCAG GCGGAGCGCC CGCTGGCGGC GCTGGCCGAA
TGGGCGGCCA CCCTACAATC CTCGCGCTGA
|
|---|
| Protein sequence | MQKLVAIKGM NDILPPDSAR WEWLEDKVRT LMARYAYRNI RTPIVEPTPL FVRGLGEVTD
IVEKEMYSFE DRLNGEQLTL RPEATAGVVR AVVEHSMLYD GGKRLYYMGP MFRHERPQRG
RYRQFHQIGA EALGFPGAEA DAEIILLAHA LWAELGLENV RLELNSLGQP DERRAHRAAL
IAYLEQHMDV LDEDARRRLH SNPLRILDTK NPAMQALVEG APRLIDFLGE ASLQHFETVK
AILDANGVAW SLNPRLVRGM DYYNLTVFEF VTDQLGSQGT ICGGGRYDYL IEQIGGKFAP
AVGWALGVER VLELLKEQET QVARPAADAY AVVPDASALP VVMAALQRLR AQGVSVQMHS
PTAAGEGMGS MKSQFKKADA SGARYALVFG ADELARGAVT VKPLRDSGEQ AERPLAALAE
WAATLQSSR
|
|---|
| |