| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1073 |
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| Symbol | |
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| ID | 7382882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1117603 |
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| End bp | 1119393 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643654388 |
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| Product | 7TM domain sensor diguanylate cyclase |
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| Protein accession | YP_002552550 |
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| Protein GI | 222110286 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.494808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTTT TGCTGTTGCT CTGGTGCGGA ATCTTGCCTG GCGGCGTGCG GCTGCGCGCG
GTGCTGGGCG GAATGCTGTG CCTGCTCGGC GCGCTGCACC CCGGCCCGGC ACAGGCCTGC
AGAGCCACGG TGCTGGAGCC GGGCAGAGGC CCGGTGGATC TGTGGGCCCA CCTGTGCATG
CGCTCTGACC CCACGCTGGC ACGCACGGTG CAGGAGATGC TGGCCACGCC CACGGCGTTC
GCGGCACCTG CGACGCGCGG CGGTTCACTG GGCGTGCGCC CGGATGCCGT GTGGCTGAAG
GCGACACTGG TCCCCCAGGC GCGCGCAGGG CCCTGGGTTA TCAATGTGGA CTTCCCGCTG
CTGAACGAAC TCGACGTCTA TCTGGTGGCG GACGGCGAGG TGCTGCAGCA TCACGCCCTG
GGCAACCTGC AGCAGCCCAG CCCCCACGCG CTGGATTGGC GCACCCCCGC GGTGGTTCTG
GCGCTGGAGC ACGAACGCAC TTACGAGCTG CTGGTGCGCG TGCGCACGCT GGGCGGAATG
ATTGTCCCGC TGCGCATCGG CACCTGGCGA GACATGGCTG CGCCCATGCT GCGCGAGCAG
ATGCTGCAGG GCCTGTTCGT GGGCCTGGCG CTGTGCCTGT TCATCTACGG TCTGCTGCAG
GCCGTTGCGC TACGAGAAAA GGTGTTCGCC TACTACGCGC TGCTGGTGCT GGGCAGCGCG
GGGTTTTCCA TCCACTTCTT TGGCATCGGC AGCCTGTTCA TCTGGGGGCA CCACCCCTGG
ATGCAGCAGC ACGCCGGCCC GCTGTTCGTC TGCATTGCGG TGATCGGCGC CTTCCTGTTC
ATGGGGCACT CGCTGGCGCG CGACAACCGG CCCGGTCGAT TTCTGCGCAC CATGCAGGGA
GGAGCCGCGC TGTCCGTCCT GCTCTGCGCC GCGTTCCTGT CAAACGTTTT GAACACGCCC
GCGACCCTCG CCACGCTGGC ACTTCTGGGG CCGCTGCCGG CGTTGGTCAG CCTGCCCGTG
GCCGCGCGGC GCATGCACGA GAACGACCCC GTGGGGCACA CGCTGCTGCT CGCATGGCCG
GCCTATATCG GCACTGCCGT CGCGCTCGCT CTGCTGGTGC ATGGGGTGCT CCCCGCCCGG
TTCTGGCCCA TGCACCTCTT CCAGATCGCA GCCGTGGTCA ACATGCTGCT GTTCATGCGC
ATGCTGGGCC TGCGCCACGC ACGCCTGCGT GACGCAGTGC AAGACGCCAG CCGGGAGCGC
GACGCGCTCA TGTCGCTGGC CCGCACCGAC CCCCTCACCG GCCTGCCCAA CCGGCGCGGC
CTGGACGCAG CCCTGGGCGC CGCGCTGCCC CACGCACAAG CCGACCGGCT GCTGGCCGTA
TTTATGCTGG ACCTGGACGG CTTCAAACCC GTCAACGATC AGCATGGGCA CGCCGTGGGC
GACCGGCTGC TGGTGGCCGT GGCGCAGCGG CTGCGCGCCC AGTTGCGCCA CGCCGACCTG
ATCGCACGGG TGGGCGGGGA CGAATTCGTC GTCATGGCGC AGCAGCTGCC CAGCGTGATG
CAGGCGCACG ATCTCGGGAT CGCACTGCTG GAATCCTTCC TGAAGCCGTT TTACGTGCAG
GGCGTCGAGA TCCGCGTGGG GTTGACGATC GGCTACGCAC TCGCGCCCGA CGACGCCTGC
GACGCCTGCA CCCTCATCCG CCTGGCGGAC GCCGCCATGT ACAGCGGCAA GCAGCAGGGC
AAGTTCTGCG TGCGCCGCAA CAAGGGCGAC CTGGCGCTGG CGTCGTCCTG A
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| Protein sequence | MRLLLLLWCG ILPGGVRLRA VLGGMLCLLG ALHPGPAQAC RATVLEPGRG PVDLWAHLCM
RSDPTLARTV QEMLATPTAF AAPATRGGSL GVRPDAVWLK ATLVPQARAG PWVINVDFPL
LNELDVYLVA DGEVLQHHAL GNLQQPSPHA LDWRTPAVVL ALEHERTYEL LVRVRTLGGM
IVPLRIGTWR DMAAPMLREQ MLQGLFVGLA LCLFIYGLLQ AVALREKVFA YYALLVLGSA
GFSIHFFGIG SLFIWGHHPW MQQHAGPLFV CIAVIGAFLF MGHSLARDNR PGRFLRTMQG
GAALSVLLCA AFLSNVLNTP ATLATLALLG PLPALVSLPV AARRMHENDP VGHTLLLAWP
AYIGTAVALA LLVHGVLPAR FWPMHLFQIA AVVNMLLFMR MLGLRHARLR DAVQDASRER
DALMSLARTD PLTGLPNRRG LDAALGAALP HAQADRLLAV FMLDLDGFKP VNDQHGHAVG
DRLLVAVAQR LRAQLRHADL IARVGGDEFV VMAQQLPSVM QAHDLGIALL ESFLKPFYVQ
GVEIRVGLTI GYALAPDDAC DACTLIRLAD AAMYSGKQQG KFCVRRNKGD LALASS
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