Gene Dtpsy_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0920 
Symbol 
ID7384423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp941768 
End bp942889 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content68% 
IMG OID643654235 
ProductCupin 4 family protein 
Protein accessionYP_002552398 
Protein GI222110134 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTTC AACAACCGCT GGCCCTGCTC GGGGGCCTGA GCCCGGCGCA GTTCATGCGC 
CGCCACTGGC ACAAGAAGCC GCTGCTGGTG CGCCAGGCCA TCCCCGGCTT CAAGCCGCTG
CTGAGCCGCG CCGAACTGCT GGAGCTGGCC GGGCAGGACG GTGTGGAGTC GCGCTTCATC
CAGGATAAGG CCGGCCAATG GGTGCTGCGC CACGGGCCGT TGGCACGCCG CTCCCTGCCG
TCCCTGGCCA CGCCGCGCTG GACAGCGCTG GTGCAAGGCG TGGATCTGCA CAACGATGCC
GTGCACGCGC TGCTACAGCA GTTCCGTTTC GTGCCGGAGG CGCGGCTTGA TGACCTGATG
ATCAGCTATG CCACCGACGG CGGAGGCGTG GGGCCGCATT TCGACAACTA CGACGTCTTC
CTGCTGCAGG CCCATGGGCG GCGGCGCTGG CGCATCGGCC GGCAAAAGGA CAAGACGCTG
CGCCCCGGGT TGCCGCTGAA GATCCTCGCG GCTTTCGAGC CCGAAGAAGA GCATGTGCTC
GAGCCCGGCG ACATGCTCTA CCTACCGCCG GGCTGGGCCC ACGATGGCAT TGCCGAGGGG
GAATGCATGA CCTATTCCAT CGGCTTTCGC TCGCCCAATG GTGCCCAGTT GGCGCATGAG
GTGCTGCAGC GTATGGCGGA GGCGGCGGCC GACGAGGAGG GGGCCATCTA CCGTGACGCA
CAGCAGTCCG CTGTTGCGAA CCCGGGAGCC ATCCCGGCCG CGTTGCAAGA CTTCGCACGC
AAGGCGGTGC AGCGCGCGTT GCAGCAGCCT CAGGCGCTGG AGTGCGCACT GGGCGAGGCT
CTGACCGAAC CCAAGCCCAA CGTGTGGTTC GAGCCGTCTC CGGCGGGCAT GCTGGAGAGC
GTGGTGCTGG ACCGGCGCAC GCGCATGATG TATGACGACA GGCATGTGTT CATCAACGGC
GAAAGCTATC GCGCGGCCGG TCGCGATGCG GTACTGATGC GTCGCTTGGC CGACGAGCGT
CTCCTGGACT CGCGGGACCT CGCGCGGGCG AGCGATGAAG CATTGGAGCT GCTGTCCGCA
TGGTGCGAGG CAGGCTGGGC CCATGCGGGC GCGCAGGCCT GA
 
Protein sequence
MDVQQPLALL GGLSPAQFMR RHWHKKPLLV RQAIPGFKPL LSRAELLELA GQDGVESRFI 
QDKAGQWVLR HGPLARRSLP SLATPRWTAL VQGVDLHNDA VHALLQQFRF VPEARLDDLM
ISYATDGGGV GPHFDNYDVF LLQAHGRRRW RIGRQKDKTL RPGLPLKILA AFEPEEEHVL
EPGDMLYLPP GWAHDGIAEG ECMTYSIGFR SPNGAQLAHE VLQRMAEAAA DEEGAIYRDA
QQSAVANPGA IPAALQDFAR KAVQRALQQP QALECALGEA LTEPKPNVWF EPSPAGMLES
VVLDRRTRMM YDDRHVFING ESYRAAGRDA VLMRRLADER LLDSRDLARA SDEALELLSA
WCEAGWAHAG AQA