| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0714 |
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| Symbol | |
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| ID | 7384219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 747028 |
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| End bp | 747990 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643654024 |
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| Product | spermidine synthase |
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| Protein accession | YP_002552193 |
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| Protein GI | 222109929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCG CCCTCACCGC GCAGGCCACG CGCTACGTGG CCGAGCGCCT GAACGCCGAC
TTCGGCTTTT ACCTCAGCGA CCGCCGCCTG CTGGCCGAAC GCCAGTCGGC CTGGCAGCAC
ATCGAGGTCT TCGACAACCC GCAGTTCGGC CGCGTGATGC GCATCGACGG CTGCTTCATG
ACCAGCGAGC GCGACGAATT CTTCTACCAC GAGCCGATGG TGCACCTGCC GGCCATCGCC
CACCCCGGCG TGCGCCGTGC GCTGGTCGTG GGCGGGGGAG ACGGCGGCGC CGCCAAGGAG
TTGCTGAAGC TGCCCGGCGT TGAGCAGGTG GTGCTGGCCG AGCTGGATGG CGAGGTGATT
GCCATGGCCC GCGATTGGCT GGGCCAGATC CACCGTGGCG CCTTTGACGA CCCGCGCCTG
GAGGTGCGCC TGGGCGACGC GCGCGCCTTC ATCGGCCAGA CCGAGGAGCG CTTCGACCAG
ATCGTCCTGG ACCTGACCGA CCCCTTCGGC CCTGCCGTGG AGCTGTACAC CGTGGAGTTC
TACGCCGCCT GCCGCCGCGC GCTCAACCCC GGCGGCGTGC TGTCGCTGCA CCTGGGCTCG
CCCGTGCACT TGCCCGAGAG CCTGGGGCGC ATCGCCGCCT CGGTGCGCGC GGTGTTCCCC
ATCTTCCGGC CCTACCTGCA GTACGTGCCG CTGTACGGCA CGCTGTGGTG CATGGGCATG
GCATCGGACA GCACGGACCC CGCCCGGCTC AGCGCCGACG AGGTGGACGC ACGCATCGCC
GCGCGCGGCC TGGGCGATCT GCAGCTGTAC AACGGGGCCG TGCACCACGC GCTGCTGGCA
CAGCCGAACT TCGTGCGTGC GCTGCTGGAT CGGCCTGCGC TGCCGCTGCA CAGCGGGGAT
GTGCTGGAAG AGGTGCGGGA CCCGGCGGAG TTGCCGCAGG TGGTGGTGTC CGCTGCCGCG
TAA
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| Protein sequence | MSGALTAQAT RYVAERLNAD FGFYLSDRRL LAERQSAWQH IEVFDNPQFG RVMRIDGCFM
TSERDEFFYH EPMVHLPAIA HPGVRRALVV GGGDGGAAKE LLKLPGVEQV VLAELDGEVI
AMARDWLGQI HRGAFDDPRL EVRLGDARAF IGQTEERFDQ IVLDLTDPFG PAVELYTVEF
YAACRRALNP GGVLSLHLGS PVHLPESLGR IAASVRAVFP IFRPYLQYVP LYGTLWCMGM
ASDSTDPARL SADEVDARIA ARGLGDLQLY NGAVHHALLA QPNFVRALLD RPALPLHSGD
VLEEVRDPAE LPQVVVSAAA
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