| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0699 |
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| Symbol | |
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| ID | 7384204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 727874 |
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| End bp | 728944 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643654009 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_002552178 |
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| Protein GI | 222109914 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGTCGT TGTTCAGTCG TCAGTCTGCC CCATTGCTGG GTGTGGACAT CAGTTCTTCC
AGCGTCAAGC TGGTGGAGTT GGGACGAGAT AAGGGAGGGG CGCTGGTTCT CGAGTGCTGT
GCAATCGAGC AACTGGAGCG TGGGTGGATC ACGGATGGCA ACATCGAAAA GTTCGATGAG
GTCGCCGAGG CGTTGCGTCG CGTTGTGAAA AAGAGCGGGA CCAAAACCAA GAATGTCGCC
CTTGCATTGC CATCCTCTGC TGTGATCACC AAGCGCATCA CGCTGCCCGG CGGGATGTCC
GAGCAGGAAC TGGAAGTGCA GGTGGAATCC CAAGCCAACC AGTACATTCC TTTTTCGCTG
GACGAGGTGA GCCTCGACTT CTGCGTGGTG GGCCCCAGCA AGAGCGCGCC AGGCGATGTC
GACGTGCTGA TTGCGGCCTC TCGCAAAGAG AAGGTGCAAG ATCGTCAAGG CCTCGCGGAG
GCGGCTGGAC TGAAGCCCGT GGTCGTCGAC ATTGAGTCGC ATGCGGCACG CTTGGCAGCA
GGGCGGCTGA TTGAAGGGTT GCCCAATCGG GGCGCCGATG CGGTCGTTGC CCTCTTTGAG
GTGGGGGCAA TGACGACGAG CATGCAGGTC ATTCGGAATG ACGATGTCTT GTATGAACGC
GACCAAGCCT TTGGTGGTGC GCAGTTGACC CAATTGATCG TGCGTCAGTA TGGGTTCTCA
CAAGAAGAAG CGGAGGGCAA GAAGCGCAAT GGCGACTTGC CTGAAGACTA TCAATCTGCT
GTCCTGCGCC CCTTCGTGGA CAGTCTCTCT CAGGAAATCA GCCGCGCGCT CCAGTTCTTC
TTTACGAGCA CCCCATACAA CCGCGTGGAT CACATCATGC TCGCAGGCGG ATCTGCCCCT
CTGCCCGGCT TGACGGAATC TGTCATTCAG AACACGGGGT TTGCGTGCAG CGTCATCAAC
CCCTTTGATG GCATGGAAGT GGGCGGGGGG GTTCGCCTCA AAAAGATGGT GCGCGAGGCG
CCGTCTTACT TGACCTCCTG TGGGCTGGCA ATGCGGAGGT TCCTGCAGTG A
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| Protein sequence | MGSLFSRQSA PLLGVDISSS SVKLVELGRD KGGALVLECC AIEQLERGWI TDGNIEKFDE
VAEALRRVVK KSGTKTKNVA LALPSSAVIT KRITLPGGMS EQELEVQVES QANQYIPFSL
DEVSLDFCVV GPSKSAPGDV DVLIAASRKE KVQDRQGLAE AAGLKPVVVD IESHAARLAA
GRLIEGLPNR GADAVVALFE VGAMTTSMQV IRNDDVLYER DQAFGGAQLT QLIVRQYGFS
QEEAEGKKRN GDLPEDYQSA VLRPFVDSLS QEISRALQFF FTSTPYNRVD HIMLAGGSAP
LPGLTESVIQ NTGFACSVIN PFDGMEVGGG VRLKKMVREA PSYLTSCGLA MRRFLQ
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