| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0592 |
|---|
| Symbol | |
|---|
| ID | 7382966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 611943 |
|---|
| End bp | 612995 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643653903 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_002552072 |
|---|
| Protein GI | 222109808 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCC TCATTGATTT GCCGACCCTT GCTGCCTTCG TGCATGAACG GGGTGCCGCA
CGCTGCATGA CCGAGCTGGC GACCGAGCTT CGCGCCGACT TCCTGCGTTG GGAGTCTTTT
GACAAGTCCG CCCGCACGGC CAGCCACAGC CCGCGCGGCG TGATTGAGCT GATGCCCGTG
GCTGACGATG CGCTTTACAG CTTCAAGTAT GTGAACGGCC ATCCCGGCAA CCCTGCCAGC
GGACTGCCCA CAGTGATGGC CTTCGGCGTG CTGGCGGAGG TCCGTACCGG CTATCCGCTG
CTGCTGTCGG AGCTGACGCT GACCACGGCG CTGCGCACCG CTGCCACGTC GGCGCTGGCG
GCGCAGGCGC TTGCACGACC CGGCAGCCGC CGCATGGCGC TGGTTGGCAA CGGGGCGCAG
GCGGAGTTCC AGGCCCTGGC CTTCCACGCG TTGCTGGGCA TCCGCGAACT GCGGGTGTAC
GACACCGACC CCGCCGCCAC CGACAAGCTG GTGCGCAACC TGGCGCACGT CGATGGCCTC
ACCGTGGAGC GCGCCGCCAG CACGGCCGAG GCCGTGCGCG GCGCGGACAT CGTGACCACG
GTCACCGCCG ACAAGAGCCG CGCCACCATC CTCACTCCCG CGATGGTGGA GCCCGGCATG
CACCTGAATG CCGTGGGTGG CGACTGCCCC GGCAAAACCG AACTGCACCC CGATGTGCTG
CGCGGGGCGC GCGTGGTCGT GGAATACGAG CCGCAAAGTC GCGTGGAGGG CGAGATCCAG
CAATTGCCCG CGGACCATCC CGTTACCGAG CTTTGGCGGG TACTGCGCGG CGACGCGCCG
GGGCGCACGC GGGCCGACGA AGTCACGGTG TTTGATTCCG TGGGCTTTGC GCTGGAGGAC
TACTCCGCAC TGCGCTACCT GTACCAGCAG GCCCAGGCGC GCGGCCTGGG CGTGGATGTG
GAGCTGGTGC CCACAGACGA CCCCAAGGAC CTGTTCGGCC GCACGCGCGG TGCGAGCGTC
CAAGGCCGCA CGCGGCTGCG GCGCGTGGCT TGA
|
|---|
| Protein sequence | MTRLIDLPTL AAFVHERGAA RCMTELATEL RADFLRWESF DKSARTASHS PRGVIELMPV
ADDALYSFKY VNGHPGNPAS GLPTVMAFGV LAEVRTGYPL LLSELTLTTA LRTAATSALA
AQALARPGSR RMALVGNGAQ AEFQALAFHA LLGIRELRVY DTDPAATDKL VRNLAHVDGL
TVERAASTAE AVRGADIVTT VTADKSRATI LTPAMVEPGM HLNAVGGDCP GKTELHPDVL
RGARVVVEYE PQSRVEGEIQ QLPADHPVTE LWRVLRGDAP GRTRADEVTV FDSVGFALED
YSALRYLYQQ AQARGLGVDV ELVPTDDPKD LFGRTRGASV QGRTRLRRVA
|
|---|
| |