| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0477 |
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| Symbol | |
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| ID | 7384064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 491649 |
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| End bp | 493244 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643653791 |
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| Product | Choline dehydrogenase |
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| Protein accession | YP_002551960 |
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| Protein GI | 222109696 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGAGT TCGACTATGT CGTGATCGGG GGCGGCTCGG CGGGCTGCGT GCTGGCGGGG
CGGCTGAGCG AGGACCCCAC GGTGCGCGTG TGCCTGTTGG AGGCGGGCGG CAGCGATGCC
AGTGTGCTCA TCCATTGCCC GGCGGGGCTG GCCGCCATGG CGCGCAGCGG CGCCTTCAAC
TGGGGGCTGC ACACCACGCC GCAGGCGGGC CTGGGCGGGC GTCGGGGCTA CCAGCCGCGC
GGCAAGGTGC TGGGTGGTTC CAGCTCGGTC AACGCCATGA TCTACGCGCG CGGCCACGCC
AGCGACTACG ACCACTGGGC TGCGGCCGGC AATGCAGGCT GGGGCTGGAA CGACGTGCTG
CCGTACTTTC TCCGGGCCGA GCACAACGAG CGCGGTGCAA GCGCCTGGCA CGGCGCGGAC
GGGCCGCTGA ATGTGGCGGA CCTGCAGTCG CCGCAGCGTG CCAGCCGCGC CTTCGTCGAA
GCCGGCGTGC AGGCTGGCCA TCCACGCAAT GACGACTTCA ACGGCGCGCA ACTGGAGGGC
GTGGGTCTCT ACCAGGTCAC GCACCGGGCG GGCGAACGCT TCAGCGTGGC CAAGGCCTAC
CTCACGCCCC ACCTGGGCCG GACCAATCTG CAGGTGGTGA CCGGCGCGCA GGCCACGCGC
ATCCTGTTTG CGGGCCGGCG CGCCACGGGC GTGGAATACC GCCGAGGCGG CCAGACGCAG
CAGGTGCGCG CCACGCGTGA GGTGCTGCTG TCGGCGGGGG CGCTGCTATC GCCGCAATTG
CTCATGCTCT CGGGTGTGGG GCCGGGCGCG CAGTTGCAGA GCCACGGCAT TGGCGTGGTG
CACGATTTGC CGGGCGTGGG CGCGCATCTG CACGACCATC CCGACGTGGT GCAGGTGATG
GACGCACCGC GGTTGACGGA CCTCTTCGGC CTGTCGCTGC CCGGGGCGCT GAACGTGCTG
CGCGGCGTGC GGGAGTGGCG TGCGCACCGC AGCGGCATGC TGACCACCAA CTTCGCCGAG
GCTGGAGGCT TCATCAAGAG TCGCCCCGAG GAGCCGTTGC CCGACCTGCA GCTGCACTTC
GTGGTCGGCA AGCTGCTGGA CCACGGCCGG CGGGCCACAT GGGGCCATGG CTATTCCTGC
CATGTATGCC TGCTGCAGCC CCGAAGCCGC GGCCGGGTGA CGCTGGCCAG CGCCGACCCG
GCGGCCGCTC CGCTGGTGGA CCCGGCATTC TTCAGTGATC CCGACGACAT GCAACGCATG
GTGCGCGGCG TGCGGCGCAT GCGCGAGATC TTGGCGCAGC CCGCCCTGGC CAGCCTGGGC
GCGCGTGAAC TGCCCCATTC GTCCCGTGCG CAAAGCGATG CACAGATCGA GCAGTTCATC
CGCGACTGGG CCGACACCAT CTACCACCCC GTGGGCACGT GCCGCATGGG CTGCGGTCCG
CTGGACGTGG TGGATGCCCA ACTGCGTGTG CATGGCCTGC AGGCTCTGCG TGTGGTGGAC
GCATCCATCA TGCCGCGCAT TGTGAGCGGC AACACGAATG CACCCACGGT GATGATTGCC
GAGCGCGCGG TGGACTTGCT GCGCCAGGCT GCATGA
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| Protein sequence | MREFDYVVIG GGSAGCVLAG RLSEDPTVRV CLLEAGGSDA SVLIHCPAGL AAMARSGAFN
WGLHTTPQAG LGGRRGYQPR GKVLGGSSSV NAMIYARGHA SDYDHWAAAG NAGWGWNDVL
PYFLRAEHNE RGASAWHGAD GPLNVADLQS PQRASRAFVE AGVQAGHPRN DDFNGAQLEG
VGLYQVTHRA GERFSVAKAY LTPHLGRTNL QVVTGAQATR ILFAGRRATG VEYRRGGQTQ
QVRATREVLL SAGALLSPQL LMLSGVGPGA QLQSHGIGVV HDLPGVGAHL HDHPDVVQVM
DAPRLTDLFG LSLPGALNVL RGVREWRAHR SGMLTTNFAE AGGFIKSRPE EPLPDLQLHF
VVGKLLDHGR RATWGHGYSC HVCLLQPRSR GRVTLASADP AAAPLVDPAF FSDPDDMQRM
VRGVRRMREI LAQPALASLG ARELPHSSRA QSDAQIEQFI RDWADTIYHP VGTCRMGCGP
LDVVDAQLRV HGLQALRVVD ASIMPRIVSG NTNAPTVMIA ERAVDLLRQA A
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