| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0165 |
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| Symbol | |
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| ID | 7383429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 184270 |
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| End bp | 187059 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643653479 |
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| Product | methionine synthase |
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| Protein accession | YP_002551650 |
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| Protein GI | 222109386 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.10252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCGT CCGCCCCCGC ATCTTCCGTC CCTTCGCACG CCGTGCCGCC CATGCGCCTG
TCGGGGCTGG AGCCCGTGTT CATCGGCGAG GGGAGCTTGT TCGTCAACGT GGGCGAGCGC
ACCAACGTCA CCGGCTCCAA GGCGTTCGCG CGCATGATCC TGAATGACCA GTACGAGCAG
GCACTGTCGG TGGCGCGCCA GCAGGTGGAA AACGGCGCGC AGATCATCGA CGTGAACATG
GACGAGGCCA TGCTGGACAG CAAGGCCGCG ATGGTGCGCT TCCTGAACCT CATTGCCTCC
GAGCCCGACA TCGCCCGGGT GCCGGTGATG GTGGACAGCT CCAAGTGGGA GGTCATCGAG
GCCGGCCTGC GCTGCCTGCA GGGCAAGGGC ATCGTCAACT CCATCAGCAT GAAGGAGGGC
GTGGAAGAGT TCAAGCGCCA GGCCAAGCTG ATCCGCCGCT ACGGCGCGGC TGCCGTGGTC
ATGGCCTTCG ACGAGAAGGG CCAGGCCGAC ACCTTCGCAC GCAAGACCGA GATCTGCGAG
CGCGCCTACC GCATCCTGGT GGACGAGGTG GGCATGGCGC CCGAGGACAT CATCTTCGAT
CCCAACATCT TCGCCATCGC CACGGGCATC GAAGAGCACG CCAACTACGC CGTGGACTTC
ATCGAGGCCG TGCGCTGGAT CAAGCAGCAT CTGCCGGGTG CCAAGGTGTC GGGCGGCGTG
TCCAACGTGT CGTTCAGCTT CCGCGGCAAC GAGCCGGTGC GCGAGGCGAT CCACACCGTG
TTCCTGTACC ACGCCATCAA GGCCGGCATG GACATGGGCA TCGTCAACGC GGGCATGGTC
GGCGTTTACG ACGATCTTGA CCCCGAGCTG CGCGAGCGTG TGGAAGACGT GGTGTTGAAC
CGCCGCCCCG ACGCGGCCGA ACGCCTGCTG GAGATCGCCG AGGCCGCCAA GGGCGCCGCC
AAGGACGACA GCAAGAAGCT GGAGTGGCGC GGCACGCCCG AGCACCCGAA AACCGTGGGC
GAGCGCCTGT CGCACGCGCT GGTACACGGC ATCACCGACT TCATCGTCGA AGACACCGAG
GAGGCCTACC AGCAGATCGT GGTGCAAGGC GGCGGCCGCC CGCTGCACGT GATCGAAGGC
CCGCTGATGG ACGGCATGAA CATCGTGGGC GACCTGTTCG GAGCGGGCAA GATGTTCCTG
CCGCAGGTGG TCAAGAGCGC CCGCGTGATG AAGCAGGCCG TGGCCCACCT GATCCCTTAC
ATCGAGGAAG AAAAGCGCCA GCAGGAAGCC GCCGGCCTGG ACGTGTCCAG CAAGGGCAAG
ATCGTCATCG CCACCGTGAA GGGCGACGTG CATGACATCG GCAAGAACAT CGTGACCGTC
GTCCTGCAGT GCAACAACTT CGAGGTCATC AACATGGGCG TGATGGTGCC CTGCCATGAA
ATCCTGGCGC GCGCCAAGGC CGAAGGCGCG GACATCATCG GCCTGTCGGG CCTCATCACG
CCCAGCCTGG AAGAGATGCA GTACGTGGCC GGCGAGATGG ACAAGGACGA GTACTTCCGC
ATCAAGAAGA TTCCATTGCT GATCGGCGGC GCCACCTGCT CGCGCGTGCA CACGGCGGTC
AAGATCGCGC CGCAGTACCA GGGCCCCGTG GTCTACGTGC CCGATGCCTC GCGCAGCGTG
AGCGTGGCGC AGAGCCTGCT GGGCGAGCAA AAGGACAGCT ACCTGGCGGA GGTGCAGGCC
GACTACGACC ATGTGCGCCA CCTGCATGCC AACAAGAAGA AGACACCGGT GTGGCCGCTG
GCGCAGTGCC GCGCCAACAA GACGCGCATC GACTGGGCGC ATTACCAGCC GCCGGCGCCC
AAGTTCATCG GCCGGCGCGT GATCAAGAAC ATCGACCTGG CCGAGCTGGT GCCCTTCATC
GACTGGGCGC CGTACTTCCA GACCTGGGAC CTGGCCGGCA AGTACCCCGA CATCCTGCAG
GACGAGGTGG TGGGCGAGGA AGCCACGCGC GTCTTCCGCG ACGCACAGGC CATGCTCAAG
AAGATCGTGG AGGGCCGCTG GCTCACGGCC CACGCCGTGG TGGGCTTCTG GCCCGCCAAC
ACCGTGCGCG ATGACGACAT CGAGCTGTAC GCCGATGCCG CGCGCGACAA GGTCGTGCTC
ACCTGGTACG GCCTGCGCCA GCAGGCCGAG AAGCAGCCCG ACGCCGAGGG CCGCATGCGC
CCCAGCCGCT GCCTGGCCGA CTTCATCGCG CCTCGCCCGG AGGGTGGCGC ACCCACGCAG
GCCGACCACA TTGGCGCGTT TGCCGTCACT GCCGGCATCG GCGTGGATGC CAAGGTGGCA
GAGTTCATGG CCGACCACGA CGACTACAAC GCCATCACCC TCAAGGCCCT GGCCGATCGC
CTGGCCGAGG CCGGTGCCGA ATGGCTGCAC CACCGCGTGC GCACCGACTG GTGGGGCTAC
CAGGCGGGCG AGCAGCTGTC CAACGACGAA CTGATCGCTG AGAAGTACGT AGGCATCCGC
CCCGCGCCGG GCTACCCCGC ATGCCCTGAT CACCGGGTGA AGAAGCCGCT GTTTGCATTG
CTGGGCACGG CCGACGTGGA CATGGACATT ACCGACAGCT ACGCCATGAC GCCCGCGGCC
AGTGTGAGCG GCTTTTACTT CAGCCACCCC GAGAGCACCT ACTTCAGCGT CGGCAAGATC
GACGATGCGC AGGTGCAGGA CATGGCCCAG CGCAGCGGAG TGCCCCTGGC CGAGGTGGAG
CGCGCGCTCG CTCCGAATCT GGGGCTTTAG
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| Protein sequence | MPSSAPASSV PSHAVPPMRL SGLEPVFIGE GSLFVNVGER TNVTGSKAFA RMILNDQYEQ
ALSVARQQVE NGAQIIDVNM DEAMLDSKAA MVRFLNLIAS EPDIARVPVM VDSSKWEVIE
AGLRCLQGKG IVNSISMKEG VEEFKRQAKL IRRYGAAAVV MAFDEKGQAD TFARKTEICE
RAYRILVDEV GMAPEDIIFD PNIFAIATGI EEHANYAVDF IEAVRWIKQH LPGAKVSGGV
SNVSFSFRGN EPVREAIHTV FLYHAIKAGM DMGIVNAGMV GVYDDLDPEL RERVEDVVLN
RRPDAAERLL EIAEAAKGAA KDDSKKLEWR GTPEHPKTVG ERLSHALVHG ITDFIVEDTE
EAYQQIVVQG GGRPLHVIEG PLMDGMNIVG DLFGAGKMFL PQVVKSARVM KQAVAHLIPY
IEEEKRQQEA AGLDVSSKGK IVIATVKGDV HDIGKNIVTV VLQCNNFEVI NMGVMVPCHE
ILARAKAEGA DIIGLSGLIT PSLEEMQYVA GEMDKDEYFR IKKIPLLIGG ATCSRVHTAV
KIAPQYQGPV VYVPDASRSV SVAQSLLGEQ KDSYLAEVQA DYDHVRHLHA NKKKTPVWPL
AQCRANKTRI DWAHYQPPAP KFIGRRVIKN IDLAELVPFI DWAPYFQTWD LAGKYPDILQ
DEVVGEEATR VFRDAQAMLK KIVEGRWLTA HAVVGFWPAN TVRDDDIELY ADAARDKVVL
TWYGLRQQAE KQPDAEGRMR PSRCLADFIA PRPEGGAPTQ ADHIGAFAVT AGIGVDAKVA
EFMADHDDYN AITLKALADR LAEAGAEWLH HRVRTDWWGY QAGEQLSNDE LIAEKYVGIR
PAPGYPACPD HRVKKPLFAL LGTADVDMDI TDSYAMTPAA SVSGFYFSHP ESTYFSVGKI
DDAQVQDMAQ RSGVPLAEVE RALAPNLGL
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