| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0106 |
|---|
| Symbol | |
|---|
| ID | 7384338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 114535 |
|---|
| End bp | 116562 |
|---|
| Gene Length | 2028 bp |
|---|
| Protein Length | 675 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643653422 |
|---|
| Product | anaerobic ribonucleoside triphosphate reductase |
|---|
| Protein accession | YP_002551593 |
|---|
| Protein GI | 222109329 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
|---|
| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAC CATCTCCGAT CGTCGCCAGC CTGCCGCGCG ACGTCATCCA ACGCAACGGC
GAGCGCACGC CTTTCGATGC TGTGCGCATC CAGTCGGCCA TCGCCCGGGC CGGCCAGGCC
ACGGGCGAGT TCGGCGAGGA CGAGGCCCGT CTGCTCACGG CGCAGGCCAC CAAGGTGCTG
ATCCACCGCT TCCATGGCGA GGCGCCGGCC ATCGAGCAGA TCCAGGACGT GGTGGAGCAG
ACGCTGATCG CCGCCAACCA TCTGCAGACC GCGCGCGCCT ACATGGCCTA CCGCCAGCGC
CACGCCACCC TGCGCGCCGA CCGGCAGACG CTGGTGCATG TGGAAAGCTC CATCAACGAG
TACCTCACGC GCGCCGATTG GCGTGTGAAC GCCAACGCCA ACCAGGGCTA CTCGCTGGGC
GGGCTGATCC TGAACGTGGC AGGCAAGGTG ACGGCGAACT ACTGGCTCTC GCACGTCTAC
GCACCCGAGA TCGGCGAGGC GCACCGCAAT GGCGACATCC ACATCCACGA CCTCGACATG
CTCAGCGGCT ACTGCGCGGG CTGGTCGCTG CGTACGCTGC TGCACGAGGG GCTCAACGGC
GTGCCGGGCA AGGTGGAGGC GGGGCCCCCG AAGCACATGA GCTCCGCCGT GGGGCAGATC
GTGAACTTCC TCGGCACGCT GCAGAACGAG TGGGCGGGTG CGCAGGCGTT CTCGTCGTTC
GACACCTACA TGGCGCCCTT CGTGCGCAAG GACGGCATGG ACTACGCCGC CGTGCGCCAG
TGCATCCAGG AGCTGGTCTA CAACCTCAAC GTGCCCTCGC GCTGGGGCAC ACAGACGCCG
TTCACCAACC TCACCTTCGA CTGGACCTGC CCCGAGGATC TGCGCGAGCA GGTGCCGGTG
ATCGGCGGCG TGGAGATGCC GTTTTGCTAC GGCGAGCTGC AGGCCGAGAT GGACGTCATC
AACCGCGCCT ACATCGACGT GATGACCACG GGCGATGCCA AGGGCCGCGT GTTCACCTTC
CCGATTCCCA CGTACAACAT CACGCCCGAC TTCCCGTGGG AGAGCGAGAA CGCCGTCGCC
CTGTTCGACA TGACGGCCAA GTACGGCCTG CCGTACTTCC AGAACTTCAT CAATTCCGAG
CTGTCGCCCA ACATGGTGCG CTCCATGTGC TGCCGCCTGC AGCTCGACCT GCGCGAGCTC
TTGAAGCGCG GCAATGGCCT GTTCGGCAGC GCCGAGCAGA CCGGCAGCCT GGGCGTGGTC
ACCGTCAACT GCGCGCGGCT GGGCTACCTG CACGCGGGCG ATGAGGCGAG CCTGTTCGCC
GCCCTGGATC GCCTGCTGGA GCTGGGCAAG CAGAGCCTGG AAGTCAAGCG CAAGCTCATC
CAGCGCCTCA TGGACCAGGG CCTGTTCCCG TACACCAAGC GCTACCTGGG CACGCTGCGC
AACCACTTCA GCACGCTGGG CGTGAACGGC ATCAACGAGA TGGTGCGCAA CTTCACGCAC
GACGCGCACG ACATCACCAG CGACTGGGGC CACCAGTTCG CGCTGCGCCT GCTGGACCAT
GTGCGCGCGC GCATGACGGC TTTCCAGGAA GAAACCGGCC ACCTCTACAA CCTGGAAGCC
ACGCCCGCTG AGGGCACGAC CTACCGCTTC GCCAAGGAAG ACAAGAAGCG CTGGCCCGCC
ATCCTGCAGG CCGGTACGGC CGAGCAGCCC TACTACACCA ACAGCTCGCA GTTGCCCGTG
GGCTTCACCG ACGACCCGTT CGAGGCGCTG CAGCGGCAAG AGGCGCTGCA GGGCAAGTAC
ACCGGCGGCA CGGTGCTGCA CCTGTACATG GGCGAGCGCA TCTCCAGCGG CGCGGCCTGC
CGCGAGCTGG TGAAACGGGC GCTCACCCAC TTCCGCCTGC CCTACATCAC CGTCACGCCC
ACCTTCTCCA TCTGCCCCAC GCACGGCTAC TTGGCGGGCG AACACCCGTT CTGCCCGCGC
TGCGACGAGG AGCGCCTGGC CGCCAAGCGC GCGCGGCTGG CGGCGTGA
|
|---|
| Protein sequence | MTPPSPIVAS LPRDVIQRNG ERTPFDAVRI QSAIARAGQA TGEFGEDEAR LLTAQATKVL
IHRFHGEAPA IEQIQDVVEQ TLIAANHLQT ARAYMAYRQR HATLRADRQT LVHVESSINE
YLTRADWRVN ANANQGYSLG GLILNVAGKV TANYWLSHVY APEIGEAHRN GDIHIHDLDM
LSGYCAGWSL RTLLHEGLNG VPGKVEAGPP KHMSSAVGQI VNFLGTLQNE WAGAQAFSSF
DTYMAPFVRK DGMDYAAVRQ CIQELVYNLN VPSRWGTQTP FTNLTFDWTC PEDLREQVPV
IGGVEMPFCY GELQAEMDVI NRAYIDVMTT GDAKGRVFTF PIPTYNITPD FPWESENAVA
LFDMTAKYGL PYFQNFINSE LSPNMVRSMC CRLQLDLREL LKRGNGLFGS AEQTGSLGVV
TVNCARLGYL HAGDEASLFA ALDRLLELGK QSLEVKRKLI QRLMDQGLFP YTKRYLGTLR
NHFSTLGVNG INEMVRNFTH DAHDITSDWG HQFALRLLDH VRARMTAFQE ETGHLYNLEA
TPAEGTTYRF AKEDKKRWPA ILQAGTAEQP YYTNSSQLPV GFTDDPFEAL QRQEALQGKY
TGGTVLHLYM GERISSGAAC RELVKRALTH FRLPYITVTP TFSICPTHGY LAGEHPFCPR
CDEERLAAKR ARLAA
|
|---|
| |