Gene Dtox_4227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4227 
Symbol 
ID8431241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4397870 
End bp4398439 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content48% 
IMG OID645036419 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003193517 
Protein GI258517295 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.684836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAAAAA ATGTTGTTTT GGACCCCGGG CATGGCGGCC AGGACCCAGG TGCCATCGGA 
GTAAATGGTC TTCAGGAGAA AAAAGTTAAC TGGGATGTCG CTAATATTGT CAAAGAACAG
CTTGCCGGGT ATGACTGCGT GGTTCACATC ATGCAGCCCA GCTGCACAAA CCCCAACAGC
ACATCAAGCG ATGAGCTGCG GCTGCCGGTG AAGTATGCCA ATAACATTAA GGCAGACTTC
TATTTGTCGG TACACGAAAA TGCCGGCGGC GGTACCGGGT TTGAATCCCA TGTGTACACG
CATCCCAGCG AACTGGCTCT CAAGTATCAG GATGCTATCC ATAATGAAGT AGCTGCGTAT
ATGGCAAAGT TCGGATTTCG TGACCGTGGA AAAAGACGCT CCAATTTCTA TGTTTTGAGG
GAAACAAATA TGCCGGCAGT GCTGCTTGAG AATTTGTTTA TTGACTCCGC CGCTAATGCT
GCTGCACTGC AAAACCCGGA ATTTTTGCAT GGGCTGGGAA ATGCCATTGC CTATGGTATC
GTTTTAGCGT TAGGGTTAAA AAAAATATAG
 
Protein sequence
MRKNVVLDPG HGGQDPGAIG VNGLQEKKVN WDVANIVKEQ LAGYDCVVHI MQPSCTNPNS 
TSSDELRLPV KYANNIKADF YLSVHENAGG GTGFESHVYT HPSELALKYQ DAIHNEVAAY
MAKFGFRDRG KRRSNFYVLR ETNMPAVLLE NLFIDSAANA AALQNPEFLH GLGNAIAYGI
VLALGLKKI