Gene Dtox_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3993 
Symbol 
ID8431008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4178420 
End bp4179481 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content39% 
IMG OID645036210 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003193308 
Protein GI258517086 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.284344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGT TTGATTACCA TGCAATAGAT TCGGAGCTTT ATAAGCCGGA TATCGTTAAT 
CTTCTTTCTG CTATCCACGA GTATAAAGGC AAACAAGAAC TCTTTATAGA GGTGCAACCT
GATATTTTAG AAGCGATGCT TAAGGTTGCC AAGATTCAAA GTACCGGTGC CTCAAACCGA
ATTGAAGGAA TTTATACTTC TGAAGCCCGG TTACATGAGT TAGTTATTGA GGAAGCGGTA
CCGAGGAATC GAGATGAACA GGAAATAGCC GGATATCGTG AAGTATTAAA TACTATACAC
GAAAACTATG AGTATATTCC TCCAACCCCC AATATTATTT TACAATTACA TCGAGACTTA
TATACTTATA GTCCAGCATC TGTAGGTGGG CGCTACAAAA ATACTGATAA CGTTATTGAG
GAAGTAGATA ACGAAGGAAA CCGCAGGACA CGCTTTCAGC CTTTACCTGC CTACGCTACA
GTTGATGCCA TGGAAGCGCT TAGTAAGGAA TTTTTAAAAG CCATTGACCG TAGTGATATA
GACCCACTAA TACTTATTGC AAAATTCATA CTGGATTTTC TCTGCATTCA CCCTTTTAAT
GATGGTAATG GACGCATGAG CAGATTGTTG ACGCTTTTAT TGCTTTACCA GCAAGGCTAT
ATTGTTGGGA AGTATATCAG TATTGAAATG ATTATTGAAA ATACTAAGGA AAGTTATTAT
GAAGCGCTTG AGCTAAGTTC CAAAGGATGG CATGACGGGA AAAGTAACTA TGCTCCCTTT
GTCAAATATT ATCTAGGTGT TATTCTAAGT GCGTATAAAG AATTCGCAAG CAGGGTAGAA
ACAATTCGTA ATAAAGGGCT TACGAAGTCT GAGCGTATTC GCCATATTTT TTCAAATAAA
GTAGGAAAAA TCACAAAGGC AGAAATCGCC ACCTTATGCC CGGATGTAAG TATTACAACA
ATTGAGAAGG CGCTTTCAGA TTTGTTAAAA GAAGAATACA TCATAAAAAT CGGCGCTGGC
CGCAGCACAG CCTATATTCG CAATCATGAA TCACGAGAGT AA
 
Protein sequence
MRKFDYHAID SELYKPDIVN LLSAIHEYKG KQELFIEVQP DILEAMLKVA KIQSTGASNR 
IEGIYTSEAR LHELVIEEAV PRNRDEQEIA GYREVLNTIH ENYEYIPPTP NIILQLHRDL
YTYSPASVGG RYKNTDNVIE EVDNEGNRRT RFQPLPAYAT VDAMEALSKE FLKAIDRSDI
DPLILIAKFI LDFLCIHPFN DGNGRMSRLL TLLLLYQQGY IVGKYISIEM IIENTKESYY
EALELSSKGW HDGKSNYAPF VKYYLGVILS AYKEFASRVE TIRNKGLTKS ERIRHIFSNK
VGKITKAEIA TLCPDVSITT IEKALSDLLK EEYIIKIGAG RSTAYIRNHE SRE