Gene Dtox_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3988 
Symbol 
ID8431003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4175423 
End bp4175905 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content40% 
IMG OID645036206 
ProductVanZ family protein 
Protein accessionYP_003193304 
Protein GI258517082 
COG category[S] Function unknown 
COG ID[COG5652] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0330326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGTA AAATATTAGA TGTAAAGATT GGAAAGTCTC TGTTTTTATC CTGGTTATTG 
GTATTGGCAT GGATGTCCTT CATATTTTAT TTATCCTCGC AGCCGGCACC GGTATCCAAT
TCGCTCAGTA AAAAGGTGGC AAAAACTGTT ATTGAAGGTG TCGATAAGGT TGAGGGACGA
GATGCAAAAG CTTATAAATT AAATAAAGTA AATAATTTAA CCCGTGACTA TGCTCATGGA
GGCGTATTTG GGGTATTGAG TATTCTTGCG CTCAGTGCGC TGCGCAAAAG CGGTTTCAAA
AGCCGCGCTG CATATTTGAC TGCCTTTTTA ATTTGTGCAT GCTACGCTTG TACGGATGAG
TTTCATCAAA TATTTGTTTC CGGCAGGGGA GCTGAATTTC AGGATTGGCT GAAGGATTGT
TTGGGTACGA TATTGGGCCT TGGCTTGTAC TTTTTTGTTG CGGCATTTAA TAAATGGTCA
TAA
 
Protein sequence
MTCKILDVKI GKSLFLSWLL VLAWMSFIFY LSSQPAPVSN SLSKKVAKTV IEGVDKVEGR 
DAKAYKLNKV NNLTRDYAHG GVFGVLSILA LSALRKSGFK SRAAYLTAFL ICACYACTDE
FHQIFVSGRG AEFQDWLKDC LGTILGLGLY FFVAAFNKWS