Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3924 |
Symbol | |
ID | 8430938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 4097056 |
End bp | 4098021 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 645036141 |
Product | integrase family protein |
Protein accession | YP_003193240 |
Protein GI | 258517018 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.733894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTACAG CAAAGAAAAA AACCAGGTTG GTTAGAATTG TAGAGCAGGA AGAACTGACT AGAAGTGTTT CATGGGAGGA AGCTTTACAG GAATTTTTAT TGTTAAAGAA GGCTGAAGGA AAGTCTGAAA GAACCATTAA AGATTACGGT TATCATATTA AACACTTTTT TAGACTTTAT CCTGATACCG ACTTGGCAGA TGCCGGTATA CTAAAGAGGC GAATCATTGA TTACATGGCT GAAGAAGTTA AACCGGCATA TTACAATAAT AAGCTGGTTT ATATGAAGAC TTTTTTTAAC TGGTGTGTTA AAGAACGAGT CCTTATCGAG AACCCAGTAA AAGAGTTTAA AAGACGGAAA GCAGATGAAC GTATTGTGCA GTTCGACTTG GAGTTATTAA AAAAATTATT GGCTATACCA GATCAGTCAA CCTATCCAGG GCTACGTGAT TATGCACTGT TGCTGCTTCA GTTAGATTCG GGAATTAGAC CGAAAGAAGC ATTGTCTTTG CTAATTTCAG ATGTAAACTT TAAATCTCTA GAGGTTTATA TTAGGGCTGA GAATGCAAAA ACACGTGTTT CAAGAACGCT GCCAATTAGT CCAATAACAG CTAAAGCAAT ACAAAAGTTA ATAAATGTTA GGCCAAGTGA TTGGAATGAC GTACCTATTT TTTGTTCATG TGAGGGCAAT AAAATGCTAG GTAATACCTG GTATAAAAGG TTAAGTAAGT ATGGTGAAAA ATTAGGGACA AAGCTTTACC CGTATCAGTT ACGTCATACC TTTGCTTTAG AGTTTTTGAG AAACGGCGGA AATTCATTTG CCTTACAAAA AACACTTGGT CATGCTGACC TTAATATGAC TAAGAGGTAT GTCTCGCTGG CTGATAATGA TGTTAAGAGT CAACACCTTA TTGCTTCTCC AGTTTCTAAA TTGGTTCAGC AGTCGAGTAG AGTGGGGAAG ATTTAA
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Protein sequence | MSTAKKKTRL VRIVEQEELT RSVSWEEALQ EFLLLKKAEG KSERTIKDYG YHIKHFFRLY PDTDLADAGI LKRRIIDYMA EEVKPAYYNN KLVYMKTFFN WCVKERVLIE NPVKEFKRRK ADERIVQFDL ELLKKLLAIP DQSTYPGLRD YALLLLQLDS GIRPKEALSL LISDVNFKSL EVYIRAENAK TRVSRTLPIS PITAKAIQKL INVRPSDWND VPIFCSCEGN KMLGNTWYKR LSKYGEKLGT KLYPYQLRHT FALEFLRNGG NSFALQKTLG HADLNMTKRY VSLADNDVKS QHLIASPVSK LVQQSSRVGK I
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