Gene Dtox_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3924 
Symbol 
ID8430938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4097056 
End bp4098021 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content37% 
IMG OID645036141 
Productintegrase family protein 
Protein accessionYP_003193240 
Protein GI258517018 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.733894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTACAG CAAAGAAAAA AACCAGGTTG GTTAGAATTG TAGAGCAGGA AGAACTGACT 
AGAAGTGTTT CATGGGAGGA AGCTTTACAG GAATTTTTAT TGTTAAAGAA GGCTGAAGGA
AAGTCTGAAA GAACCATTAA AGATTACGGT TATCATATTA AACACTTTTT TAGACTTTAT
CCTGATACCG ACTTGGCAGA TGCCGGTATA CTAAAGAGGC GAATCATTGA TTACATGGCT
GAAGAAGTTA AACCGGCATA TTACAATAAT AAGCTGGTTT ATATGAAGAC TTTTTTTAAC
TGGTGTGTTA AAGAACGAGT CCTTATCGAG AACCCAGTAA AAGAGTTTAA AAGACGGAAA
GCAGATGAAC GTATTGTGCA GTTCGACTTG GAGTTATTAA AAAAATTATT GGCTATACCA
GATCAGTCAA CCTATCCAGG GCTACGTGAT TATGCACTGT TGCTGCTTCA GTTAGATTCG
GGAATTAGAC CGAAAGAAGC ATTGTCTTTG CTAATTTCAG ATGTAAACTT TAAATCTCTA
GAGGTTTATA TTAGGGCTGA GAATGCAAAA ACACGTGTTT CAAGAACGCT GCCAATTAGT
CCAATAACAG CTAAAGCAAT ACAAAAGTTA ATAAATGTTA GGCCAAGTGA TTGGAATGAC
GTACCTATTT TTTGTTCATG TGAGGGCAAT AAAATGCTAG GTAATACCTG GTATAAAAGG
TTAAGTAAGT ATGGTGAAAA ATTAGGGACA AAGCTTTACC CGTATCAGTT ACGTCATACC
TTTGCTTTAG AGTTTTTGAG AAACGGCGGA AATTCATTTG CCTTACAAAA AACACTTGGT
CATGCTGACC TTAATATGAC TAAGAGGTAT GTCTCGCTGG CTGATAATGA TGTTAAGAGT
CAACACCTTA TTGCTTCTCC AGTTTCTAAA TTGGTTCAGC AGTCGAGTAG AGTGGGGAAG
ATTTAA
 
Protein sequence
MSTAKKKTRL VRIVEQEELT RSVSWEEALQ EFLLLKKAEG KSERTIKDYG YHIKHFFRLY 
PDTDLADAGI LKRRIIDYMA EEVKPAYYNN KLVYMKTFFN WCVKERVLIE NPVKEFKRRK
ADERIVQFDL ELLKKLLAIP DQSTYPGLRD YALLLLQLDS GIRPKEALSL LISDVNFKSL
EVYIRAENAK TRVSRTLPIS PITAKAIQKL INVRPSDWND VPIFCSCEGN KMLGNTWYKR
LSKYGEKLGT KLYPYQLRHT FALEFLRNGG NSFALQKTLG HADLNMTKRY VSLADNDVKS
QHLIASPVSK LVQQSSRVGK I