Gene Dtox_3858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3858 
Symbol 
ID8430872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4044910 
End bp4046292 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content37% 
IMG OID645036085 
Productadenylosuccinate lyase 
Protein accessionYP_003193184 
Protein GI258516962 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAA TTAAAGCTTT GACTTCGATT GAAGGTCGCT ATGGCAGTGT AACAACAAAC 
TTAGAAAACT ATTTTTCTGA GTGGGCATTA ATGAAATTCC GCGTGCATAT TGAGGTTGAA
TGGCTGATTA CAATGGCTTC TAATCCGGAA TTTCACGACA TAAGAGGCTT GACTATTGAA
GAAACACAGT TTCTCAGAAA TATAGCAGCT AATTTTAATG AAGAACTCGC TTTAAAAATA
AAAGAGATTG AAAAGGTTAC TAACCATGAT GTGAAAGCGG TGGAATATTT CTTGAGGGAA
ATGCTAAAAG ATACATCACT TTCGGATGTA ATTGAATTTA TTCATTTTGC TTGTACATCA
GAAGACATAA ATAATTTGTC CTATGCTTTA ATGTTAAAAC AGGGAATGAA TGAAGCTTGG
TTACCGATGG CGAAAAAACT TGTGGATGAA GTTGCTAATA TGGCAGAAGA ATTAAAAGAT
GTTCCAATGT TATCCCATAC TCATGGGCAG CCAGCCTCGC CAACTACTGT CGGGAAGGAA
CTGGCAATAT TTGTTTATAG GTGGAACCGA CAGCTAAAGT TAGTTTGTTC ACTTGAATAT
CTTGGTAAAT TTAATGGAGC TGTAGGTAAT TTCAATGCTC ATAAAATCGC GTATCCTGAT
GTTGAATGGG AGAAAGTATC CAAGGAGTTT GTATGCGGCT TGGGCCTAGA GTATAATCCC
ATGACCACGC AGATCGAGTC TCATGATTAT ATGGCTGAAT GTTTCCATGC AATCAGTCGT
TTTAACAATA TTGTTTTAGA TTTTGACAGG GATGTATGGT TATATATTTC ACTTGGATAT
TTTAAACAGA AAATGGCAAA AGGAGAGGTT GGATCTTCAA CAATGCCGCA TAAAGTCAAT
CCGATTGATT TTGAGAATGC TGAAGCGAAC CTTGGGATAA GCAATTCTAT ACTGCGATTT
CTCGCGAATA AGCTTCCAAT ATCACGTATG CAAAGAGATC TTAGCGATTC ATCTGCTCAG
AGGAATATAG GGGCGGCAAT TGCGTATTCA TACATAGCGA TTAATTCTAC TTTGAGAGGG
TTCAGAAAAA TATCTATAAA TCCCAAGACT ATTGAAGATG ATTTTGAGGA AGCCTGGGAA
GTTATTGCTG AAGCTGTACA AACAGTTATG AGAAAGCATG GCTATTGCAA CCCATATGAA
AGGCTCAAGG AAATTACTCG TGGAAAGATG ATTGGAAAAG AAGAAATAAG AGCATTTATT
TCAAGCGTTG AACTACCTGA AGAAGATAAA ATGCGACTAA TGGAATTGAG TCCTCAGAAG
TATATTGGGT TGGCAGATGA ACTAGTGAAA CATATTAGCC TGACGGGAGA ACTTGACAAA
TAA
 
Protein sequence
MNRIKALTSI EGRYGSVTTN LENYFSEWAL MKFRVHIEVE WLITMASNPE FHDIRGLTIE 
ETQFLRNIAA NFNEELALKI KEIEKVTNHD VKAVEYFLRE MLKDTSLSDV IEFIHFACTS
EDINNLSYAL MLKQGMNEAW LPMAKKLVDE VANMAEELKD VPMLSHTHGQ PASPTTVGKE
LAIFVYRWNR QLKLVCSLEY LGKFNGAVGN FNAHKIAYPD VEWEKVSKEF VCGLGLEYNP
MTTQIESHDY MAECFHAISR FNNIVLDFDR DVWLYISLGY FKQKMAKGEV GSSTMPHKVN
PIDFENAEAN LGISNSILRF LANKLPISRM QRDLSDSSAQ RNIGAAIAYS YIAINSTLRG
FRKISINPKT IEDDFEEAWE VIAEAVQTVM RKHGYCNPYE RLKEITRGKM IGKEEIRAFI
SSVELPEEDK MRLMELSPQK YIGLADELVK HISLTGELDK