Gene Dtox_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3348 
SymbolvalS 
ID8430342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3549489 
End bp3552134 
Gene Length2646 bp 
Protein Length881 aa 
Translation table11 
GC content51% 
IMG OID645035582 
Productvalyl-tRNA synthetase 
Protein accessionYP_003192701 
Protein GI258516479 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID[TIGR00422] valyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000651158 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAAAC CCGATATTTC TACCGTCTAT AACCCTAAAG AAGTAGAGGA GAAGTGGTAT 
CAACACTGGG AAGAAAACCA CTTTTTTCAC ACAGAAGTCG ATCTTTCGGC CAAGCCTTTT
TGTATTGTCA TGCCGCCACC CAATGTAACC GGGCAGCTGC ATGGAGGGCA TGCGCTGGAT
AACACTCTGC AGGATATCTT AACTCGTTTT CGCCGTATGC AGGGCTGCAA TACTTTATGG
CTGCCGGGAA CAGACCATGC AGGCATAGCC ACCCAGGCCA AGGTGGAAGA ACAGCTCGCT
CAGGAAGGCA CCACGAAACA CGAACTGGGC AGAGAGAAAT TCCTGGAGCG TGTTTGGGCC
TGGAAAGAGC GGTACGGCGG GCGCATTACG CACCAGCTTA GGAGACTGGG TGCTTCCTGT
GACTGGGAGA GAGAGAGATT TACCATGGAT GAAGGCTGTT CCTCCGCTGT GAGAGAAGTA
TTTATCCGGC TTTATGAAAA AGGTTTAATC TACCGGGGCA ATTATATTAC CAACTGGTGT
CCCAAATGCC ACACCACCAT TTCCGATATT GAAGTGGAGC ACCTGGACAA GCCGGGTCAC
CTTTACCACC TTAAATACCC GGCCAAAGAC AGTGCAGATT ATCTGGTGGT GGCTACTACC
CGCCCGGAAA CCATGCTGGG TGATGTTGCC GTGGCAGTGC ATCCGGAAGA CGCTCGCTAT
AAACACCTGG TGGGCAAGAC CGTTATTTTG CCTTTGGTTG GCCGGGAGAT ACCTGTTATT
GCCGATGAAT ATGTTGACCC GGCATTTGGT ACAGGCGCCT TGAAGATTAC CCCGGCTCAT
GACCCCAACG ACTTTGAAGT TGCCCAGAGA CACGATTTGC CTTCAGTTCA GGTAATTGAC
AAGCACGGGG TGATGAATGA AACAGCGGGC CGCTACCGGG GGTTAGACCG CTGGGAATGC
AGAAAGAAAA TCGTTAAAGA TCTGGATGCT CAGGGTTACT TGATTAAAAT TGACGATCAT
GACCATGCTG TAGGTCACTG TTACCGCTGT AATACAGTTA TTGAACCAAT GCTTTCCAAG
CAGTGGTTTG TTCGCATGCG TCCCTTAGCC GAACCTGCCA TAAAAGCTGC CGTGGACGGC
AGTGTAAAGT TTATACCCGA ACGTTTTACT AAAATATATT TAAACTGGAT GGAAAACATT
CGTGACTGGT GTATTTCCCG CCAGCTCTGG TGGGGACACC GCATACCTGT TTGGTATTGC
CGGGCTTGTG ACGAGCTGGT AGCCTCCAAA ACACCGGTGA CAGTTTGTCC CAAGTGCGGC
GGCACGCAAT TGGAGCAGGA TCCTGATGTT CTGGATACCT GGTTTTCTTC GGCGCTCTGG
CCTTTCTCCA CACTGGGCTG GCCCTCGGAG ACAGCGGAAT TGAAGCATTT CTATCCTACT
TCTGTGCTGG TTACCGGGCG GGACATTATA TTCTTCTGGG TGGCCCGCAT GATTTTTTCC
GGACTGGAAT TCATGGAAGA AGTGCCCTTC AGAGAAGTAT TTATCCACGG CCTGGTTTTA
GACGCTCTGG GCCGCAAGAT GAGCAAATCC TTGGGCAACG GTATTGATCC TATAGATTTA
ATCGAGAGCC ACGGTGCCGA CAGCCTGCGT TTCATGCTGG TTACGGGCAA TACCCCCGGC
AATGACCTGC GCTTTCATTT CGAAAGGCTG GACGGAGCAC GCAATTTTGC CAATAAGCTG
TGGAATGCTT CGCGTTTCTC ACTTATGAAC TTGTCTGACT ATGATCCGGA GAAGCCGGTG
GACAGTCAGG ATTACAGTCT GGCTGACCGC TGGATGATCA GCCGCTACCA GGCAACTGTA
AAAAGTGTGA CCAAAAACCT GGAGGCCTAT GAACTGGGTG AGGCTGCCCG TTCACTATAT
GAATTTATCT GGGGTGAGTT TTGCGACTGG TATCTTGAAC TGATCAAGCC CAGGGTTTAC
GGCAAGGAAG GTGAAAAGGC CCGCCATACA GCCCAGCGGG TTTTGGCTTC AGTGTTGAAG
GGTACCCTGG AATTATTGCA CCCCTTCATG CCTTTTATTA CAGAGGAAAT CTGGCAGCAC
CTGCCGCATG ACGGGCAGAC TGTCATGCAC GCCGCCTGGC CGGTCTATAA AGAGGACTTA
ATCGACCCGG AAGCAGAAAA ACGTATGGAA ATTTTGATGG AAGTAACCAA AGAAATCCGG
CGCATCCGCA GTGAAATGAA CGTGCCGCCA TCCAAGCAGG CTGAGGCGAT ATTGCTGGTG
GAAGACGAGG AAGTGCGGGA AATACTGACA GGCGGCATTT CCTATATAGA AAATTTGGCT
CGCTGCAGCT CGCAAACAGT CAGCCAGTTG AAAGATGACT TGGGACAGGC TGTTCACGCG
GTGACCCACG GCGTAGAGGT TTACGTGCCG CTGAAGGGTC TTATTGATAT AGACAAAGAA
ATTGCCCGGC TGGAAAAAGA ACTTAAATCA GTTAAGCAGG ATTTGGCCAA AGTGCGGGGC
AAGCTGAACA ACTCCGGTTA CCTGGCCAAG GCACCGGCAG AAGTGATTGA AAAAGACCGG
GGCAAAGAGG CAGAGCTTGC GGCCAAGGAA AAAGCTTTGG CGGAGAGAAT TTCTGTGTTG
AAGTAA
 
Protein sequence
MNKPDISTVY NPKEVEEKWY QHWEENHFFH TEVDLSAKPF CIVMPPPNVT GQLHGGHALD 
NTLQDILTRF RRMQGCNTLW LPGTDHAGIA TQAKVEEQLA QEGTTKHELG REKFLERVWA
WKERYGGRIT HQLRRLGASC DWERERFTMD EGCSSAVREV FIRLYEKGLI YRGNYITNWC
PKCHTTISDI EVEHLDKPGH LYHLKYPAKD SADYLVVATT RPETMLGDVA VAVHPEDARY
KHLVGKTVIL PLVGREIPVI ADEYVDPAFG TGALKITPAH DPNDFEVAQR HDLPSVQVID
KHGVMNETAG RYRGLDRWEC RKKIVKDLDA QGYLIKIDDH DHAVGHCYRC NTVIEPMLSK
QWFVRMRPLA EPAIKAAVDG SVKFIPERFT KIYLNWMENI RDWCISRQLW WGHRIPVWYC
RACDELVASK TPVTVCPKCG GTQLEQDPDV LDTWFSSALW PFSTLGWPSE TAELKHFYPT
SVLVTGRDII FFWVARMIFS GLEFMEEVPF REVFIHGLVL DALGRKMSKS LGNGIDPIDL
IESHGADSLR FMLVTGNTPG NDLRFHFERL DGARNFANKL WNASRFSLMN LSDYDPEKPV
DSQDYSLADR WMISRYQATV KSVTKNLEAY ELGEAARSLY EFIWGEFCDW YLELIKPRVY
GKEGEKARHT AQRVLASVLK GTLELLHPFM PFITEEIWQH LPHDGQTVMH AAWPVYKEDL
IDPEAEKRME ILMEVTKEIR RIRSEMNVPP SKQAEAILLV EDEEVREILT GGISYIENLA
RCSSQTVSQL KDDLGQAVHA VTHGVEVYVP LKGLIDIDKE IARLEKELKS VKQDLAKVRG
KLNNSGYLAK APAEVIEKDR GKEAELAAKE KALAERISVL K