Gene Dtox_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3343 
Symbol 
ID8430337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3545017 
End bp3545475 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content50% 
IMG OID645035578 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003192697 
Protein GI258516475 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0721684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCG AAGAAAAAAT TAAATCCCTT GGTCTTAGCG TGCCGCCTGC GCCGCAGCCT 
GTAGCCGCCT ATGTCCCGGC GGTAAAAAGC GGTTCCTATA TCTACACCTC CGGACAATTG
CCGCTGGTTG CAGGTGAATT GAAGTATACA GGCAAAATAG GTCAAGATTT AGTGTTGGAG
GAAGGATATG AGGCGGCTAA AATCTGCGCC TTAAATTGTT TGGCAGCGGT TAAAAGCTTC
ACGGGCAGCC TGGATGAGAT AGTCCAGATT ATCAGACTGA CTGGTTTTGT CAACAGCGGC
CGGGGCTTTA CCGGTCAACC GCAAGTAATT AACGGCGCTT CAGAGTTGTT AGCTGAGATT
TTTGGCGAAA AAGGCAGGCA TGCCCGTTCA GCTGTGGGAG TTAGCGAATT GCCGTTAAAT
GCGGCCGTAG AGCTGGAAAT GATTGTGCAG ATCCGTTAA
 
Protein sequence
MSPEEKIKSL GLSVPPAPQP VAAYVPAVKS GSYIYTSGQL PLVAGELKYT GKIGQDLVLE 
EGYEAAKICA LNCLAAVKSF TGSLDEIVQI IRLTGFVNSG RGFTGQPQVI NGASELLAEI
FGEKGRHARS AVGVSELPLN AAVELEMIVQ IR