Gene Dtox_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3103 
Symbol 
ID8430097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3299648 
End bp3300679 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content49% 
IMG OID645035359 
ProductrecA protein 
Protein accessionYP_003192478 
Protein GI258516256 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000175278 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.820651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAG ACAAGCAAAA AGCTTTGGAA CGCGCTCTGG CCGATATTGA GAAGCAGTTC 
GGCAAAGGGG CTGTTATGAA ACTTGGCGAG TCTCCGGCAA AGAATGTGGA GGTTATTTCC
ACAGGTGTTT TATCTCTTGA TATTGCTCTT GGTATTGGTG GTGTTCCCAG GGGCAGAGTT
GTTGAGATAT ACGGGCCTGA GTCTTCCGGT AAAACAACTG TGGCGCTGCA TGTAGTTGCC
GAAGCCCAGA AAGATGGGGG GATGGCAGCG TTTGTGGATG CGGAGCATGC CCTGGATCCG
ACTTATGCCC AAAAACTGGG CGTAGATATT GAAAATTTGC TGGTTTCCCA GCCTGATACG
GGTGAGCAGG CGCTGGAAAT TGCCGAAGCT CTGGTGCGCA GCGGGGCGGT TGATGTTATT
GTGGTGGATT CAGTAGCCGC TCTGGTGCCC AGGGCGGAGA TTGAAGGTGA TATGGGTGAT
TCACATGTAG GTTTGCAGGC CCGTTTGATG TCGCAGGCCC TGCGCAAACT TACCGGTGTG
GTCAGCAAAT CCAACTGCAC AATCATATTC ATTAATCAAC TGAGAGAAAA AGTAGGAGTA
ATGTTTGGCA ATCCTGAGAC AACTCCGGGG GGAAGGGCGC TAAAGTTCTA CTCGTCAATC
AGGCTGGATG TGCGTAAAGG TGAGCCTATA AAACAGGGTG CTGATTTTAC CGGTAATCGC
ACAAAAGTTA AAGTCGTGAA AAATAAGATG GCTCCGCCTT TTAAACAGGC AGAGTTTGAC
ATTATGTTTG GAACCGGTAT TTCCCGTGAA GGCACACTGC TGGATGTGGC TGTTGATCTC
AATATTATTA ATAAGAGCGG TGCCTGGTAT TCTTATAATA ATGAGCGCCT GGGCCAGGGC
AGGGAAAATG TTAAGGATTT ATTGAAAGAA AAGCAGGAGA TGGCGCGGGA AATTGAACAA
AAGGTGCGGG CTCTGGTAAA TGTGGCTCCG CAACAACCGG CCGGTCCGGA GCAAAGTGAT
TTGTCTGTGT AG
 
Protein sequence
MQQDKQKALE RALADIEKQF GKGAVMKLGE SPAKNVEVIS TGVLSLDIAL GIGGVPRGRV 
VEIYGPESSG KTTVALHVVA EAQKDGGMAA FVDAEHALDP TYAQKLGVDI ENLLVSQPDT
GEQALEIAEA LVRSGAVDVI VVDSVAALVP RAEIEGDMGD SHVGLQARLM SQALRKLTGV
VSKSNCTIIF INQLREKVGV MFGNPETTPG GRALKFYSSI RLDVRKGEPI KQGADFTGNR
TKVKVVKNKM APPFKQAEFD IMFGTGISRE GTLLDVAVDL NIINKSGAWY SYNNERLGQG
RENVKDLLKE KQEMAREIEQ KVRALVNVAP QQPAGPEQSD LSV