Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2883 |
Symbol | |
ID | 8429872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 3064026 |
End bp | 3064991 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645035146 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003192270 |
Protein GI | 258516048 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000839866 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCCGG AAATAATTGA ATTTTCAGAG GAAATACCGG CCAAAGTCTC GGTGCAGAGG ATCGACGAAT ACCCCTACCA CTGGCACAAT GCCGTGGAGA TCATTCTGGT GCTGGACGGC CGGGCCGAGG TAACACTGTG CGGTGAAACC CATCTGCTGA AAAAGGGCGG CGTTGCCGTC GTCAATGTGA ATGAGCCGCA CCGCATCAAA AAAAGCGGCG GGGAAAACCG GCTGCTGCTT TTGCAGATAG ACCCCGCCTT TTGCAGGAGC GTTGATCCGG AGTTCGACGA TGTAATCTTT TTTTGCTGTT CCACTTATCA CGAGGCCGAG GTACCGGAAA AATACCGCCG CATGAAGGAG AGCATCACCC ATCTGGCGCT TCTCCTTGAC GAGGATGGCA GCCCGGTCCA GGAGGCTGAT GTCAGAGCCG GACTGAATGA ACTGCTCAAC CATATGATTC AAGGCTTCGA CTACTTACAC TACGGTGCCG GAACCCAACC CATCCCTGAA AAGCTGGTAC AACGGTACAG AATGATTTAT GAGTACCTTC GCCAAACGCC GGGAGCCAAA AACCCTCTTT CGGAGCTGGC AAAGGCCGCG GGTGTCTCTC CCCAGCATCT GTCCGGTGAC ATCAGTGAAA AATTCGGCCT TACCCTGCGG GAGCTGATAT ACAGCGGCAA CTGTATGGAA GCAGTCCGGC TGCTTTTAAG CACGGATAAA ATGATTTACG AAATTTCACC GGCCAGCGGT TTCTCCGACC CCAAGTACCT TATCAAGGCT TTCAAACAGT TTTACGGCTG CACCCCCTCC GAATTCCGCA AACGTCACAA AGTCGGGCCG GAAGGACTGG CGGCGCAAAC ACGGTATGAG GACTTTCCCC CGTCCTTCAT AAAGAAATAT ATAAATATTT TTCAGGACCT GAAAAGTGTC AATGCGAAGG ATAAAAAATC CATTTACAAT AGATAA
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Protein sequence | MYPEIIEFSE EIPAKVSVQR IDEYPYHWHN AVEIILVLDG RAEVTLCGET HLLKKGGVAV VNVNEPHRIK KSGGENRLLL LQIDPAFCRS VDPEFDDVIF FCCSTYHEAE VPEKYRRMKE SITHLALLLD EDGSPVQEAD VRAGLNELLN HMIQGFDYLH YGAGTQPIPE KLVQRYRMIY EYLRQTPGAK NPLSELAKAA GVSPQHLSGD ISEKFGLTLR ELIYSGNCME AVRLLLSTDK MIYEISPASG FSDPKYLIKA FKQFYGCTPS EFRKRHKVGP EGLAAQTRYE DFPPSFIKKY INIFQDLKSV NAKDKKSIYN R
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