| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2584 |
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| Symbol | |
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| ID | 8429570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 2736835 |
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| End bp | 2738736 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645034873 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003192000 |
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| Protein GI | 258515778 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.931562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.224926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGGTT TATTAGCCAT GATAAAAACA CCCCAGGACT TGCGACTGCT GGATAATAGC
CAAATTAATG AGTTGGCTGG AGAAATACGT CAAAAAATAA TTGAGACGGT ATCAGAAACC
GGTGGTCATT TAGCGCCTAA TTTGGGTGTA GTTGAATTAA CACTGGCATT GCACCGGGTT
TTTAATTTAC CTCAAGACAA AATAATTTGG GATGTAGGAC ACCAGTGTTA TGTACATAAA
CTGTTAACCG GTCGCAAGGA AAGGTTTTCC ACTCTGCGCC AGTATGGTGG TATCAGCGGC
TTCCCCAGGC TTATTGAGAG TGCCTATGAC AGTTTTGGCA CAGGCCACAG CAGCACCTCA
ATTTCTGCCG CCTTGGGCTT TGCGATAGCA CGTGATTATC TAAAGGAAAA ACATTCAGTG
GCTGCCGTAA TCGGAGACGG TGCCATGACC GGAGGACTGG CCTTTGAGGC ATTAAACCAT
GCCGGGCATC TTAAGAAGGA TCTTATAGTC GTATTAAATG ACAATGAAAT GTCAATAGCT
CCTAACGTAG GTGCTATGTC CGGTTATTTA AGCCGGATTC GCACTGATCC TATGTATTCC
AGAAGCAAGG ATGAAGTTGA ACAGCTGCTG TTAAAAATCC CTAATATTGG TCCCAAGGTT
TTAAAAGTCA TAGACAGATT AAAGGACAGC TTTAAATACC TGGTAGTACC GGGCATGCTT
TTCGAAGAAC TGGGTTTTAC TTATTTGGGA CCGGTGGACG GGCATAATTA CCAGGCTACT
GTTAATCTTT TAAAGCAGGC TAAAACCTGT AAAGGACCTG TATTGGTACA TGTTCAAACT
CAGAAGGGCA AGGGTTACTT GCCGGCAGAA AGCAACGCTG ATAAGTTTCA TGGGGTGGGG
CCTTTTAAGA TAGAAACAGG TGATGTGATC AACAGTACCG GGACTGTCAC CTATACGGAA
GTTTTCGGGG ATATAATTGT CAAACTGGCG GAAACAGACA GGAGAATTCA GGCTATAACT
GCCGCCATGC CGGATGGCAC AGGATTGAGA AAATTTGCCA ATATTTATCC GGATCGTTTT
TTTGATGTCG GAATAGCTGA AGGTCATGCT GTTACTCTGG CTGCTGGTAT GGCATGCGCA
GGCTTAAAAC CTGTGGTGGC CATTTACTCT ACTTTTTTAC AGCGGGCTTA TGATCAGGTG
ATTCATGACG TATGTTTACA AAATTTACCT GTCCTTTTTG CTGTTGACAG GGCCGGTATT
GTTGGTGATG ACGGGGCTAC CCACCAGGGA TTATTTGATT TGTCTTACCT GCGCCCGATA
CCTAACCTGG TAATTATGTC ACCTAAAGAT GAAAATGAGT TTCAACATAT GTTGAATACT
GCAGTAAAGT TTCAGGGCCC GTGTGCTCTT CGTTTTCCGC GCGGCATTGG TACCGGTTGC
GTTCTGGATA AAGAAATGAA GGAATTGCCT ATTGGACAGG CGGAAGTTGT TCGTAAAGGA
AAAAATATAG CCATAATTGC CATAGGCAAC ATGGTCAAGG TAGCTGAAGA CGCTGCAAGA
ATTTTAGCTC AACAGGGCGT TGACGCTGCC GTTGTTAACG CGCGTTTTAT TAAGCCCTTA
GACGAAAAAT GCATTTTGGA TTTGGCTGCC AATACGAATT TGTTGGTAAC TGTGGAAGAA
AATATGCTTA GCGGCGGGTT TGGCAGTTCT GTTTTGGAGT TGCTGACAGC AAGCGGTTTA
AAGACAAGGA CTCATTGCAT AGGCATACCT GATAATTTTA TCGAGCACGG TCATCCCAAG
CTGCTCAGGG ATATTTACGG TTTGACTGCC GAAGGGCTGG TCAAAGAAAT AAATATGCTT
TTAGGTTACA GAAGCAATAC CTTGAAGCTG ATAGCTGATT AG
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| Protein sequence | MNGLLAMIKT PQDLRLLDNS QINELAGEIR QKIIETVSET GGHLAPNLGV VELTLALHRV
FNLPQDKIIW DVGHQCYVHK LLTGRKERFS TLRQYGGISG FPRLIESAYD SFGTGHSSTS
ISAALGFAIA RDYLKEKHSV AAVIGDGAMT GGLAFEALNH AGHLKKDLIV VLNDNEMSIA
PNVGAMSGYL SRIRTDPMYS RSKDEVEQLL LKIPNIGPKV LKVIDRLKDS FKYLVVPGML
FEELGFTYLG PVDGHNYQAT VNLLKQAKTC KGPVLVHVQT QKGKGYLPAE SNADKFHGVG
PFKIETGDVI NSTGTVTYTE VFGDIIVKLA ETDRRIQAIT AAMPDGTGLR KFANIYPDRF
FDVGIAEGHA VTLAAGMACA GLKPVVAIYS TFLQRAYDQV IHDVCLQNLP VLFAVDRAGI
VGDDGATHQG LFDLSYLRPI PNLVIMSPKD ENEFQHMLNT AVKFQGPCAL RFPRGIGTGC
VLDKEMKELP IGQAEVVRKG KNIAIIAIGN MVKVAEDAAR ILAQQGVDAA VVNARFIKPL
DEKCILDLAA NTNLLVTVEE NMLSGGFGSS VLELLTASGL KTRTHCIGIP DNFIEHGHPK
LLRDIYGLTA EGLVKEINML LGYRSNTLKL IAD
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