| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2565 |
|---|
| Symbol | |
|---|
| ID | 8429551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 2719001 |
|---|
| End bp | 2720074 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 645034855 |
|---|
| Product | spore germination protein |
|---|
| Protein accession | YP_003191982 |
|---|
| Protein GI | 258515760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.760269 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC AGTCAATCTC AAATAAGGAT TTAATGTTTC TTATAATAAG TTTTTTAATT
GGTACGGCAA TAATGCAAAT AACGCCTGCC TTGGTAAAAG AAGCTAGACA AGATGCATGG
CTGTCTTTAT TGATAAGCAT GATTTTATCA ATCGTACTTG CCAAACTATT AATATCTCTA
CAAAGATTAT TTCCCAACCA ATCCTTAATC CAATATAGCG TCAATATACT TGGTTACCCA
ATTGGAAAAG CGATTAGTGG CATTTTTCTT TGGTTTGCTT TTTTTCTATC TGCTCTTATT
TTGCGAAATA TAGGAGATTT TGTTCAGGCA CTTATTTTAC CACATACGCC TCTTGTGATA
ATACATACAA TTATAATGAT TATTATCGCC TATGCTATAA GAAGTGGACT CGAAGTATTT
ACAAGAGTTA TAATCATTAT ACTTCCGTTA TCTATACTAT TTTTCTTGAT AATTTCTACT
TTAAATTTGC CTCAATTAGA AATCAATCGT ATTGTACCTT TTATGGAAAA CGGTTACAAA
CCCTTAATTC GTGGTGCAAT AGTAGGGGTA TCTTTTCCTT TCGGGGAGAT ACTTATCTTT
TCTATGATAT TATTCCAGAC AAATCATTCC AAACAATATG ATAAATTTAT TATATATGGT
ATAATATTTG CCTATATATT TCTAGTTTTA AGTATTTTGC GTACTATCAG TGCTTTGGGT
GTAGAATCAA CTATACGCTA TATTTATCCT ATTATTGAAA CAGTGCAAGA ATCATCAAGT
ATATTAACGA TTTTGGTAAC ATTAAATTGG TTTGCATTTG CATTTAGCAA GTTATCTATA
TGTTTTTATG CTTTAACTTC GGGGTTGGCA CAATGGTTTA ATATAAAATA CTATCAAGCC
ATAGTTACAC CAATGGGTGT AATAATTATA GCATTTTCTA CATTTATGTA TTCTAATTAC
ACTGAAGAAG TATACTATGC CTATAAGATT AATCCCTATT TCAAAATACC TATCGAATTT
GGAATACCTT TTCTCCTTTG GTTAGTTGCA AAAATACGTT TTAAAAAATT ATAA
|
|---|
| Protein sequence | MSQQSISNKD LMFLIISFLI GTAIMQITPA LVKEARQDAW LSLLISMILS IVLAKLLISL
QRLFPNQSLI QYSVNILGYP IGKAISGIFL WFAFFLSALI LRNIGDFVQA LILPHTPLVI
IHTIIMIIIA YAIRSGLEVF TRVIIIILPL SILFFLIIST LNLPQLEINR IVPFMENGYK
PLIRGAIVGV SFPFGEILIF SMILFQTNHS KQYDKFIIYG IIFAYIFLVL SILRTISALG
VESTIRYIYP IIETVQESSS ILTILVTLNW FAFAFSKLSI CFYALTSGLA QWFNIKYYQA
IVTPMGVIII AFSTFMYSNY TEEVYYAYKI NPYFKIPIEF GIPFLLWLVA KIRFKKL
|
|---|
| |