Gene Dtox_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2421 
Symbol 
ID8429407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2599570 
End bp2600541 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content39% 
IMG OID645034728 
Productintegrase family protein 
Protein accessionYP_003191855 
Protein GI258515633 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0129159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTA TAAGCGGTTT TAGAAAAAGG TCAATTGAAG TTCCAGATGA AACCGGATAT 
AAAATTGATT TTGACTATGC AGTCGAACTT TTTAAAGATG CCTATATGGT TGACGAGTGG
AGCCAGCGTA CTTTAAACTA CCACCTGGAA AACCTGACCG CATTTAAAAA GTTTTTGACC
ACACAGGCAG TAAATATTTC TTTGATTTCT GCTAAGACCT TGGATGAATA TGTAAAGAGC
ATGAAGAATG CCGACAAAAA GAAAAACACA ATAAATGGCC GGGTAAAAAC TTTGAGAGTA
TTCTTCCGTA TATTAAATGA AAAAGAATAC ATTCCCGATA ACCCGGCTCT TGGCCTCAAA
ACAATCAGAG GTCCCAAACC GGAAATATTT CCTTTTAGTG ACGAACAGAT AAATGCACTT
TTGGCACAAC CGGACAGGAC AACCTTTGCA GGACTGCGCG ACTACATGAT CATGCAAATA
CTGCTTGACA CCGGCGTAAG GTTAGAAGAG TTATGTAATA TCAAGTATTC CGATGTTAAT
TTAAAAACAT GCAGAATTTT AGTTCGCAAG GGCAAAGGAA ATAAATCAAG AACTGTATTG
TTCGGTTCTG AAACACGCCG CACGATTATG AAATATCTTA AGGTTACCGG TGACCTGGAT
GCTGAAACTA ACCTAATACT AAATCAAGAC GGTAATCCAT TAAAACAGCG TTCAGTGCAG
GACAGAATAT CACTGCACGC TAGTGCAGCC GGATTAAAAG GCGTTCGCCC CAGTCCACAT
ACTTTTAGGC ATACATTTGC CAAAAAATTT TTAATGAACG GGGGCGACCC TTATGTTTTG
CGTGACCTTT TAGGTCACAA TAGTATGAGC ACAGTAATTA TTTATCTAAG GCTTTTCAGT
GATGACCTAG CTAAAAAATA CCAAGGTAAA TCACCGGTAG ACAGCATATT AAGAAAGAAA
ATCAATCAAT AA
 
Protein sequence
MRIISGFRKR SIEVPDETGY KIDFDYAVEL FKDAYMVDEW SQRTLNYHLE NLTAFKKFLT 
TQAVNISLIS AKTLDEYVKS MKNADKKKNT INGRVKTLRV FFRILNEKEY IPDNPALGLK
TIRGPKPEIF PFSDEQINAL LAQPDRTTFA GLRDYMIMQI LLDTGVRLEE LCNIKYSDVN
LKTCRILVRK GKGNKSRTVL FGSETRRTIM KYLKVTGDLD AETNLILNQD GNPLKQRSVQ
DRISLHASAA GLKGVRPSPH TFRHTFAKKF LMNGGDPYVL RDLLGHNSMS TVIIYLRLFS
DDLAKKYQGK SPVDSILRKK INQ