Gene Dtox_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2345 
Symbol 
ID8429329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2516975 
End bp2517697 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID645034650 
Producttwo component transcriptional regulator, LytTR family 
Protein accessionYP_003191779 
Protein GI258515557 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.681344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTATA AAATAGCTAT CTGTGATGAT GAGGAGAATT TTGTCGTCGC ACTGCGCCAT 
CAGGTGTCGG GGATTTTGCA CAATACTGGT GTTGCCTTTG ATATCGAAGT TTTTTTCTCC
GGCGAAGCGT TATTAAACTG TATCAACGAA GAACCCGCCG GCTTTGACCT GATTTTTCTG
GATATTTTCA TGAAGGAAAT CAACGGCATT GATACGGCCA GAGCCATTCG ACTCACTAAT
AATTACGTCG CCATCATCTT CACCACCGTT TCCGGGCAAT ATGTTTATAC TGGTTATGAG
GTGCAGGCGC TGCAATATCT TTTGAAACCC ATAAATACGC AGGCCCTGGC AACCGCGCTG
TTGGTTGACC TCAAAAGGCG GTTTGAAAAC CGGTATTTTG TCTTTAAATC AAGAGGGATG
ACCCATAAAG TGCCCTATGA CGACATCGAG TTTTTTGAAA GTACCTTGAA ATCGGTGAAT
TTGGTGGCTA AACAGGGGAT TTATGAAATC AATTCCGGAA TATCCGGTAT GGAAAGCAGT
TTGCCCAAAC TGAACTTTTG CCGCTGCCAT CGTGGCTTTA TAATTAATTT CAAACAGGTT
TCTATGATGA ACGCGCAGTT TTTCACCACC CTCAGCGGGA CACTAATACC CATCGGGAAG
ACCTATGCCA AGGCGGTAAA CCGCGCTTTC TTAAATTATA TCGGCAGCAG CGATGAAGCT
TAG
 
Protein sequence
MLYKIAICDD EENFVVALRH QVSGILHNTG VAFDIEVFFS GEALLNCINE EPAGFDLIFL 
DIFMKEINGI DTARAIRLTN NYVAIIFTTV SGQYVYTGYE VQALQYLLKP INTQALATAL
LVDLKRRFEN RYFVFKSRGM THKVPYDDIE FFESTLKSVN LVAKQGIYEI NSGISGMESS
LPKLNFCRCH RGFIINFKQV SMMNAQFFTT LSGTLIPIGK TYAKAVNRAF LNYIGSSDEA