| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2183 |
|---|
| Symbol | |
|---|
| ID | 8429166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2352534 |
|---|
| End bp | 2353544 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 645034497 |
|---|
| Product | diguanylate cyclase with GAF sensor |
|---|
| Protein accession | YP_003191627 |
|---|
| Protein GI | 258515405 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00645275 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGAATCAAA ACAGTGTAAG CAATGACAAG CTACTGAAAA TTATTAACGT ACAGACTGAA
GTGGTTCAGC AAGGAATGAA TCTGAGCAAT ATTATGGATT TAGTGACACA GCGAACTCAG
CATATTACTA ATGCGGATGG TGCTTCTGTC GAATTAGTCG AGAAAAGGGA ACTCGTGTAT
AGCGCTACAT CTGGAATTGC CGAGAAATTC CTGGGTTTAA GATTGGACAT GGAAAATAGC
CTCTCGGGTG AATGTATAAG AGTGGGAGTG CCTTTGATTA GCAACGATAT TGAAAGTGAC
GACCGAGTCA ATAAAAATGC ATGTAGGCAG ATCGGCCTTA ACTCCATGAT CGTAGTTCCT
CTAATCTTCA GAAATGATAT TGTTGGCGTA ATAAAGGTTC TTTCTGCGAA GGCTGGTCAT
TTCAATGATG ACAATATTAA AATACTAGAA CTTATGTCAG GACTCATTGC CGCGGCGATG
TTCAGTGCAA TGAGAAATGA GGAAAGTGAG TTGTTTTATA AAGCCACACA TGACAGCCTG
ACAGGAATAT CGAATCGCTC CGTATTCTAT GACCGTTTAC GGCAAAGATT GTCACAGGCT
TTAAGAAAAC ATGAGAATTT CGGAATCATT TCGCTTGACA TGGATGGGTT GAAAGAGATC
AATGATAATT GGGGACATCG AGCTGGAGAT GCGGCAATCA AAGAAGTCGC GTTGCGAATT
AACAGCACGT TGCGCGAATC GGACACAGTT TCCAGGCTTG GAGGAGATGA ATTTGGAATT
ATTGCCACAA CAGCGGTAGA TCGAAATGAT CTAAGATCAT TGATTGAGCG AATAGATTGC
GAAATTATTA AACCGTTTGA ATTTGAAGAT CAGAAAATAA ATCTCAGAGC CAGCATCGGA
TATGCCCTTT TTAGTGAAGA TGGCATTGAC CTGGATGTTT TGATTGAAAA AGCAGATAAA
TCTATGTATG AAGTGAAAAG AAAACAAAAG GGACAGGGGA ATGTACGCTG A
|
|---|
| Protein sequence | MNQNSVSNDK LLKIINVQTE VVQQGMNLSN IMDLVTQRTQ HITNADGASV ELVEKRELVY
SATSGIAEKF LGLRLDMENS LSGECIRVGV PLISNDIESD DRVNKNACRQ IGLNSMIVVP
LIFRNDIVGV IKVLSAKAGH FNDDNIKILE LMSGLIAAAM FSAMRNEESE LFYKATHDSL
TGISNRSVFY DRLRQRLSQA LRKHENFGII SLDMDGLKEI NDNWGHRAGD AAIKEVALRI
NSTLRESDTV SRLGGDEFGI IATTAVDRND LRSLIERIDC EIIKPFEFED QKINLRASIG
YALFSEDGID LDVLIEKADK SMYEVKRKQK GQGNVR
|
|---|
| |