Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1639 |
Symbol | |
ID | 8428605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1719157 |
End bp | 1719912 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645033972 |
Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
Protein accession | YP_003191119 |
Protein GI | 258514897 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000777239 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00393416 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGCTGG GGCGCTTTTG GAACGGAAGG GAGTTCGTGG GAATAGTTCA AGGAGACGTT GTATATCCTA TTCACGGCAC TATTTTTCAA GCGGAGTTTT GCAGCCCGGA CCAATATGGT TTTAATTTAT CAGAGCTAAA AGTCCTGGCT CCCTGTCAAC CGGGTAAAAT CATCTGCGCC GGGTTAAATT ACCGTGATCA CGCCGATGAG ATGGGTTTTA CTTATCCAGA GGAACCTGTT CTCTTCATGA AGCCCCCTTC TTCTGTCATC GGTCCATGTG AAAATATAAT TTATCCTTCC ATGTCAAAAC AGGTGGACTA CGAAGCAGAA CTGGCCGTGG TTATGAAAAA AACTGCTCGC AGGTTGAAGC CGCAACAGGT TTTTGAACAT ATATTAGGAT ATACCTGTGC CAACGATGTA ACTGCCAGGG ATTTGCAAAA AAGGGACGGG CAGTGGACCA GGGCTAAATC CTTTGATACT TTTGCTCCCA TTGGTCCTTA TGTTAATACG GAACTGGATC CGGCTAATCT GGATATAAAA TTGTATTTAA ACGGCCAGCT AAAGCAGAAT TCAAATACCG GGCATTTTAT TTTTGGCATA GATAAACTGG TTAGTTTTAT TACTCAGGTA ATGACTTTAA ATCCGGGTGA CATCATTATG ACCGGAACAC CCTCAGGTAT CGGAGCTATG CTGCCAGGAG ATTCTGTACG GATAGAAATT CAAGGAATAG GAACACTGGA AAACCAGGTT GTATAA
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Protein sequence | MLLGRFWNGR EFVGIVQGDV VYPIHGTIFQ AEFCSPDQYG FNLSELKVLA PCQPGKIICA GLNYRDHADE MGFTYPEEPV LFMKPPSSVI GPCENIIYPS MSKQVDYEAE LAVVMKKTAR RLKPQQVFEH ILGYTCANDV TARDLQKRDG QWTRAKSFDT FAPIGPYVNT ELDPANLDIK LYLNGQLKQN SNTGHFIFGI DKLVSFITQV MTLNPGDIIM TGTPSGIGAM LPGDSVRIEI QGIGTLENQV V
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