Gene Dtox_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1639 
Symbol 
ID8428605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1719157 
End bp1719912 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content43% 
IMG OID645033972 
Product5-carboxymethyl-2-hydroxymuconateDelta- isomerase 
Protein accessionYP_003191119 
Protein GI258514897 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000777239 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00393416 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGCTGG GGCGCTTTTG GAACGGAAGG GAGTTCGTGG GAATAGTTCA AGGAGACGTT 
GTATATCCTA TTCACGGCAC TATTTTTCAA GCGGAGTTTT GCAGCCCGGA CCAATATGGT
TTTAATTTAT CAGAGCTAAA AGTCCTGGCT CCCTGTCAAC CGGGTAAAAT CATCTGCGCC
GGGTTAAATT ACCGTGATCA CGCCGATGAG ATGGGTTTTA CTTATCCAGA GGAACCTGTT
CTCTTCATGA AGCCCCCTTC TTCTGTCATC GGTCCATGTG AAAATATAAT TTATCCTTCC
ATGTCAAAAC AGGTGGACTA CGAAGCAGAA CTGGCCGTGG TTATGAAAAA AACTGCTCGC
AGGTTGAAGC CGCAACAGGT TTTTGAACAT ATATTAGGAT ATACCTGTGC CAACGATGTA
ACTGCCAGGG ATTTGCAAAA AAGGGACGGG CAGTGGACCA GGGCTAAATC CTTTGATACT
TTTGCTCCCA TTGGTCCTTA TGTTAATACG GAACTGGATC CGGCTAATCT GGATATAAAA
TTGTATTTAA ACGGCCAGCT AAAGCAGAAT TCAAATACCG GGCATTTTAT TTTTGGCATA
GATAAACTGG TTAGTTTTAT TACTCAGGTA ATGACTTTAA ATCCGGGTGA CATCATTATG
ACCGGAACAC CCTCAGGTAT CGGAGCTATG CTGCCAGGAG ATTCTGTACG GATAGAAATT
CAAGGAATAG GAACACTGGA AAACCAGGTT GTATAA
 
Protein sequence
MLLGRFWNGR EFVGIVQGDV VYPIHGTIFQ AEFCSPDQYG FNLSELKVLA PCQPGKIICA 
GLNYRDHADE MGFTYPEEPV LFMKPPSSVI GPCENIIYPS MSKQVDYEAE LAVVMKKTAR
RLKPQQVFEH ILGYTCANDV TARDLQKRDG QWTRAKSFDT FAPIGPYVNT ELDPANLDIK
LYLNGQLKQN SNTGHFIFGI DKLVSFITQV MTLNPGDIIM TGTPSGIGAM LPGDSVRIEI
QGIGTLENQV V