Gene Dtox_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1588 
Symbol 
ID8428552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1666083 
End bp1666892 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content39% 
IMG OID645033921 
ProductABC-2 type transporter 
Protein accessionYP_003191070 
Protein GI258514848 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAATTA AGCCTAAGAA GGGCTGGCAG CTAATAGATA TAAAAGAATT ATGCAACTAT 
AAGGAGTTAT TTTATTTTTT AGTTGCCAAG GAGATTAAAA TACGTTATAA GCAAACTGTT
TTAGGCGGTC TGTGGGCAGT TATTCAACCA TTCCTTTCAA TGGTTATTTT TACCTTATTT
TTGGGAAAAT TCGCTAAAAT GCCTTCTGAT GGAGTTCCTT ATCCAATTTT TAATTTTTCT
GCTCTGATTG CCTGGAATTA TTTTGCCAGT ACCGTAACAC GTTCCGGCAG CAGTCTTATT
GGGAATGTGA AATTAATATC CAGGGTTTAT TTCCCGCGCT TGATCATACC GCTGGCACCC
TCAGTTGCGG GCCTGATGGA CTTTTTCATT GCCTTCTTGG TTTTGATTGG CCTCATGTTT
TACTTTCATA TTTATCCTAC TGTTATGATA CTTTACCTTC CTCTTCTGGT TCTACTGATT
ATTTTATCTG CGAGTGGTGT CGGGTTGTTT CTTGCGTCCC TAAGTATAAA ATACAGGGAT
ATTCCAACGA TTACTCCTTT TTTGCTGCAG TTATGGATGT TTGCTTCCCC TATCGTTTAC
CCTACATCTA TGATACCGGC AGAGTACCGG CTTATTTACG CATTGAATCC AATGGCCGGA
ATATTAGAGG GGTTTCGATC TGCCCTGTTA AAAACTGTAC CCTTTCCCTG GCACATGATT
CTGATTTCTG CTATAACCAG CATAATTCTT TTTATCTTCG GGTTAATCTA TTTTCAACAG
GTGGAACGAT TTTTTGCTGA TATTATCTGA
 
Protein sequence
MIIKPKKGWQ LIDIKELCNY KELFYFLVAK EIKIRYKQTV LGGLWAVIQP FLSMVIFTLF 
LGKFAKMPSD GVPYPIFNFS ALIAWNYFAS TVTRSGSSLI GNVKLISRVY FPRLIIPLAP
SVAGLMDFFI AFLVLIGLMF YFHIYPTVMI LYLPLLVLLI ILSASGVGLF LASLSIKYRD
IPTITPFLLQ LWMFASPIVY PTSMIPAEYR LIYALNPMAG ILEGFRSALL KTVPFPWHMI
LISAITSIIL FIFGLIYFQQ VERFFADII