Gene Dtox_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0827 
Symbol 
ID8427765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp845754 
End bp846428 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID645033182 
Productphosphoserine phosphatase-like hydrolase 
Protein accessionYP_003190357 
Protein GI258514135 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01491] HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.636395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGATC AAAAAATAAA ACTTATCGCC TTTGATATGG ACGGAACACT GACCAGCGAA 
CACAGTTCCT GGGAATACCT GCACAGGCGT ATGGAAATAT GGCATGAAAA AGCACACGTT
TTTCAGGATC TCTTCTGGGC AGGCAAGATT GATTATGCTG AATTCTGCCG TCTGGACGCG
TCTTTATGGC AGGGTACTGA CTGCCTAAGA GCAGCAGAAA TACTTACTGA AATACAACTA
AGACCAAGGG CCGGAAAGGT ACTGAGAACT CTTCACCGAT CAGGTGTTAA AATAGCTTTA
CTCTCCTCCG GCTTAAAACT ATTGGCTGAT CAACTGGCTC AGATACTTCC CTTTCACCAT
CATCTGGCCA ATGAATTGGT TTGCCGGGAC GGAAGCTTTA CCGGTGAAGT GCTTATCCAT
GTATCCACCG ATGTTCGGGG TTTGCGTAAA GAAGATCACC TGCAAAATCT TATGGATAAA
TATAATATAA GACCGGAAGA AGCCGCTGCC GTCGGAGACA GCTTAGGAGA TTTGGAAATG
CTAAGGGCAA CACCCAACGC CTTGCTGATT GGAGCTAAAG ATGAGGATAA ACACAAAATT
ATGCGGGAAT TGCCTAAAAT AATTCTCTTG CAGGAGCTGG AAGACATTTT CAGGCATTTG
CCTTTCAGGG TGTAA
 
Protein sequence
MSDQKIKLIA FDMDGTLTSE HSSWEYLHRR MEIWHEKAHV FQDLFWAGKI DYAEFCRLDA 
SLWQGTDCLR AAEILTEIQL RPRAGKVLRT LHRSGVKIAL LSSGLKLLAD QLAQILPFHH
HLANELVCRD GSFTGEVLIH VSTDVRGLRK EDHLQNLMDK YNIRPEEAAA VGDSLGDLEM
LRATPNALLI GAKDEDKHKI MRELPKIILL QELEDIFRHL PFRV