Gene Dtox_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0726 
Symbol 
ID8427664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp735603 
End bp736313 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content35% 
IMG OID645033088 
Productdiguanylate cyclase 
Protein accessionYP_003190263 
Protein GI258514041 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.914342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTTA AGGAATTCAT TGTTAAGCAT ATATCCTACA TTCTTGCTTT TATCAGTTTG 
CTTTCGGGTG TAGGTATTTG TTGCATAGTA AAATATGAAG ATAATTTTAT CTATCTGGTG
TTTTTATTCA TATTTTTTCA AACAATTGCC GGATTGGTAT TGGGCAGAAT TATTAATAAT
TTATATAAGC AAGCCTACGT GGATTTTTTA ACCGGTCTAT ATAACAAAAA CTATTTCAAT
AAAAAACTAA CCAATGAACT TAAGAAGACC CAAAACTCGA ATTCTGTTTT ATCTCTTCTA
ATTATAGATA TTGATAACTT TAAAGGGATT AACGACAACT ACGGTCATGT AATGGGTGAT
AAGGTCATCA GTGCTTTAAC CAATGTCCTT CGCCAGAACT TAAGAGGTGT GGATATACTA
TCTAGATGGG GTGGCGAGGA ATTTACAGTT ATTCTTCCTG AAACCAATAC AGAAGGAGCT
GCAGCATCAG CCGAGAGATT AAGAAACATT ATTGAGGATA CCAACCTGTT TTGCGGCAAA
GTCACTGTCA GTATAGGTGT TGCATCTACT AATGGACATA TTGATAAAGA TATTTTAGTA
GCTCAGGCTG ACAAAGCCTT ATATAAAGCC AAAGAGAAAA GAAACACTGT TGTAAGCCTG
GGTTATACAG GAGGCAACCT GAGGTTGATT GAGGGTTTAC TGGCAATATA A
 
Protein sequence
MLFKEFIVKH ISYILAFISL LSGVGICCIV KYEDNFIYLV FLFIFFQTIA GLVLGRIINN 
LYKQAYVDFL TGLYNKNYFN KKLTNELKKT QNSNSVLSLL IIDIDNFKGI NDNYGHVMGD
KVISALTNVL RQNLRGVDIL SRWGGEEFTV ILPETNTEGA AASAERLRNI IEDTNLFCGK
VTVSIGVAST NGHIDKDILV AQADKALYKA KEKRNTVVSL GYTGGNLRLI EGLLAI