Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0708 |
Symbol | |
ID | 8427646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 721314 |
End bp | 722063 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645033070 |
Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
Protein accession | YP_003190245 |
Protein GI | 258514023 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCGA AAAAGCTGTG GGAAGCGTAC ATCAGTAACC GTGATAAAAA AGCCCGCGAA AAGCTTATTT TAATGTATCT CCCTCTTGTT AAGCATTTGT CGGGTCGGTT GGCGGTAAGA CTACCTATCG GCATCAGTTA TGAGGATCTG GAGGGGTATG GGGTAGTCGG TCTGATTGAA TCGATTGAGA AGTTTAATCC TGCCAAAGGT GTTAGCTTTG AGACTTTTGC CTACCGTCGT ATACGGGGAG CAATCATTGA TGAAGTCAGA AAACTTTACT GGGTACCCAG AACTCTCTGG CAGAAATTTC AGGCAGTTAA CGCAGAGAGA GAACGTTTGC GAAGAATAAA CGGTGACAAT GTAACTGATG AGCAGGTTGC TGCTTCATTA AACATATCAA TAGCAGAACT GCATAAAACT TCTAATTGCT ACAACCAATT GAATATGAAT TCACTGGATG AAGTATTAAC TTCTTCTGAC GGTGATTCTG TGAGGCTGGG TAATTTGATA CCTGATCCGA ACAGTCCTGA TCCTCTTGAT GTGGTTGAGG AGCAGGATGG TCGTCGTATT CTGGCAGAAG CAGTGAATTC TTTAAATGAG AAAGATCGCT TAGTTATGGC CCTTTATTAC CAGGAGAGAT TAACTTTGAA AGAAATCGGA CAGGTTTTGG AAGTATCAGA ATCAAGAGTT TGTCAGCTTC ATGCCCGTGC GATGTCCAGG TTAAGGCAGA AAATTAAGGA GATGCTTTAA
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Protein sequence | MEPKKLWEAY ISNRDKKARE KLILMYLPLV KHLSGRLAVR LPIGISYEDL EGYGVVGLIE SIEKFNPAKG VSFETFAYRR IRGAIIDEVR KLYWVPRTLW QKFQAVNAER ERLRRINGDN VTDEQVAASL NISIAELHKT SNCYNQLNMN SLDEVLTSSD GDSVRLGNLI PDPNSPDPLD VVEEQDGRRI LAEAVNSLNE KDRLVMALYY QERLTLKEIG QVLEVSESRV CQLHARAMSR LRQKIKEML
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