Gene Dtox_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0708 
Symbol 
ID8427646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp721314 
End bp722063 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content43% 
IMG OID645033070 
ProductRNA polymerase, sigma 28 subunit, FliA/WhiG 
Protein accessionYP_003190245 
Protein GI258514023 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGA AAAAGCTGTG GGAAGCGTAC ATCAGTAACC GTGATAAAAA AGCCCGCGAA 
AAGCTTATTT TAATGTATCT CCCTCTTGTT AAGCATTTGT CGGGTCGGTT GGCGGTAAGA
CTACCTATCG GCATCAGTTA TGAGGATCTG GAGGGGTATG GGGTAGTCGG TCTGATTGAA
TCGATTGAGA AGTTTAATCC TGCCAAAGGT GTTAGCTTTG AGACTTTTGC CTACCGTCGT
ATACGGGGAG CAATCATTGA TGAAGTCAGA AAACTTTACT GGGTACCCAG AACTCTCTGG
CAGAAATTTC AGGCAGTTAA CGCAGAGAGA GAACGTTTGC GAAGAATAAA CGGTGACAAT
GTAACTGATG AGCAGGTTGC TGCTTCATTA AACATATCAA TAGCAGAACT GCATAAAACT
TCTAATTGCT ACAACCAATT GAATATGAAT TCACTGGATG AAGTATTAAC TTCTTCTGAC
GGTGATTCTG TGAGGCTGGG TAATTTGATA CCTGATCCGA ACAGTCCTGA TCCTCTTGAT
GTGGTTGAGG AGCAGGATGG TCGTCGTATT CTGGCAGAAG CAGTGAATTC TTTAAATGAG
AAAGATCGCT TAGTTATGGC CCTTTATTAC CAGGAGAGAT TAACTTTGAA AGAAATCGGA
CAGGTTTTGG AAGTATCAGA ATCAAGAGTT TGTCAGCTTC ATGCCCGTGC GATGTCCAGG
TTAAGGCAGA AAATTAAGGA GATGCTTTAA
 
Protein sequence
MEPKKLWEAY ISNRDKKARE KLILMYLPLV KHLSGRLAVR LPIGISYEDL EGYGVVGLIE 
SIEKFNPAKG VSFETFAYRR IRGAIIDEVR KLYWVPRTLW QKFQAVNAER ERLRRINGDN
VTDEQVAASL NISIAELHKT SNCYNQLNMN SLDEVLTSSD GDSVRLGNLI PDPNSPDPLD
VVEEQDGRRI LAEAVNSLNE KDRLVMALYY QERLTLKEIG QVLEVSESRV CQLHARAMSR
LRQKIKEML