Gene Dtox_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0502 
Symbol 
ID8427437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp514667 
End bp515194 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content28% 
IMG OID645032870 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003190048 
Protein GI258513826 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.313861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTAATA AATATAGTAA AATTATTTTT ACCCTTTACT ACAAGGTTGC ATATAATGCT 
GCATATTTTT ACTGTGGAGA TAAATATATA GCCGAAGAAG CAGCTCAAGA GGCTATTTTA
AAAGCCATAC AGAATATACA TCAACTAAGG GATCCAAATA AAATTGAACC TTGGATTAAA
AAAATTGCTA TAAATAATAC TATTACACTT TTCAGAAAAC ACAAAAAGGT TCTTAGTTTA
GAAAATTCAA TGCCAATTTC GGATTCACAA GATAATTTAC CAGAATACTT TATAGACTCA
CAGGAAACGT TAAACGCTGT TAGAATGGCT ATTGATTCCC TTAATCCTGT AATGAAACAA
GTGATTTATC TCCGTTTCTA TGAAGAAATG AAAATAAAAG ATATTTCTTT AATGCTTAAA
AAGCCGGAAA ACACCATTAG AACTATAATT CATAGAGGTA AAATTTCAAT TAAGAAAAAG
TTAATAAGTG AAGGGTATTT AGAATTAAAA GAAGGGGGTA TCAAATAA
 
Protein sequence
MINKYSKIIF TLYYKVAYNA AYFYCGDKYI AEEAAQEAIL KAIQNIHQLR DPNKIEPWIK 
KIAINNTITL FRKHKKVLSL ENSMPISDSQ DNLPEYFIDS QETLNAVRMA IDSLNPVMKQ
VIYLRFYEEM KIKDISLMLK KPENTIRTII HRGKISIKKK LISEGYLELK EGGIK